init a collection of bioinformatics tools #23585
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rycee
reviewed
Mar 7, 2017
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| in stdenv.mkDerivation rec { | ||
| name = "platypus-${version}"; | ||
| version = "git-2017-03-07"; |
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This should be name = "platypus-unstable-2017-03-07";. See https://nixos.org/nixpkgs/manual/#sec-package-naming.
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Thanks for the feedback, I have fixed the naming issues.
pkgs/top-level/all-packages.nix
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| plink = callPackage ../applications/science/biology/plink/default.nix { }; | ||
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| plink-ng = callPackage ../applications/science/biology/plink-ng/default.nix { }; | ||
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| samtools = callPackage ../applications/science/biology/samtools/default.nix { }; | ||
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| SnpEff = callPackage ../applications/science/biology/SnpEff/default.nix { }; |
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I would suggest using lowercase letters here. Not a hard requirement but when possible it is preferred.
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Motivation for this change
Add some commonly used bioinformatics tools.
Things done
(nix.useSandbox on NixOS,
or option
build-use-sandboxinnix.confon non-NixOS)
nix-shell -p nox --run "nox-review wip"./result/bin/)