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picard-tools: 2.17.11 -> 2.18.1 #38165

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merged 1 commit into from Apr 9, 2018

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r-ryantm
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Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools.

This update was made based on information from https://repology.org/metapackage/picard-tools/versions.

These checks were done:

  • built on NixOS
  • Warning: no binary found that responded to help or version flags. (This warning appears even if the package isn't expected to have binaries.)
  • found 2.18.1 with grep in /nix/store/nxd67d6cdp85kjy0g2qg4005rbwdfj75-picard-tools-2.18.1
  • directory tree listing: https://gist.github.com/2fdec4f7617ad9bc0dfcd95a91d4abb6

cc @jbedo for review

Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools.

This update was made based on information from https://repology.org/metapackage/picard-tools/versions.

These checks were done:

- built on NixOS
- Warning: no binary found that responded to help or version flags. (This warning appears even if the package isn't expected to have binaries.)
- found 2.18.1 with grep in /nix/store/nxd67d6cdp85kjy0g2qg4005rbwdfj75-picard-tools-2.18.1
- directory tree listing: https://gist.github.com/2fdec4f7617ad9bc0dfcd95a91d4abb6
@GrahamcOfBorg
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Success on x86_64-darwin (full log)

Attempted: picard-tools

Partial log (click to expand)

building '/nix/store/n9m1h415332yvarab8vg7pdgskl6igrq-picard.jar.drv'...

trying https://github.com/broadinstitute/picard/releases/download/2.18.1/picard.jar
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100   600    0   600    0     0   1100      0 --:--:-- --:--:-- --:--:--  1100
100 12.6M  100 12.6M    0     0  4090k      0  0:00:03  0:00:03 --:--:-- 6038k
building '/nix/store/pv1q3n7gk19liarmw62cq6kz3f60sa25-picard-tools-2.18.1.drv'...
installing
/nix/store/kph63kwnmw9q3kpdnv72ddhp7n13xhf1-picard-tools-2.18.1

@GrahamcOfBorg
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No attempt on aarch64-linux (full log)

The following builds were skipped because they don't evaluate on aarch64-linux: picard-tools

Partial log (click to expand)


a) For `nixos-rebuild` you can set
  { nixpkgs.config.allowUnfree = true; }
in configuration.nix to override this.

b) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowUnfree = true; }
to ~/.config/nixpkgs/config.nix.


@GrahamcOfBorg
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Success on x86_64-linux (full log)

Attempted: picard-tools

Partial log (click to expand)

building '/nix/store/bhcdfz2xcyxwbikj704wdfpw0r8yysf5-picard.jar.drv'...

trying https://github.com/broadinstitute/picard/releases/download/2.18.1/picard.jar
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100   600    0   600    0     0   6521      0 --:--:-- --:--:-- --:--:--  6451
100 12.6M  100 12.6M    0     0  15.8M      0 --:--:-- --:--:-- --:--:-- 15.8M
building '/nix/store/8by3d2y5i3ngaiaba80z3f7lcl584d4h-picard-tools-2.18.1.drv'...
installing
/nix/store/nxd67d6cdp85kjy0g2qg4005rbwdfj75-picard-tools-2.18.1

@matthewbauer matthewbauer merged commit 209dce5 into NixOS:master Apr 9, 2018
@r-ryantm r-ryantm deleted the auto-update/picard-tools branch April 9, 2018 05:27
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3 participants