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pythonPackages.pymc3: init at 3.2 #39662

Merged
merged 2 commits into from Apr 29, 2018
Merged

pythonPackages.pymc3: init at 3.2 #39662

merged 2 commits into from Apr 29, 2018

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1pakch
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@1pakch 1pakch commented Apr 28, 2018

Rebase of #39660 on master

Motivation for this change

pymc3 is a Bayesian inference library based on Theano

  • Adds the latest stable version of pymc3
  • Updates patsy (required by pymc3) from 0.3.0 to 0.5.0.
Things done
  • Tested using sandboxing
  • Built on platform(s)
    • NixOS
    • macOS
    • other Linux distributions
  • Tested the library
  • Fits [CONTRIBUTING.md]

@1pakch 1pakch requested a review from FRidh as a code owner April 28, 2018 21:12
@1pakch 1pakch mentioned this pull request Apr 28, 2018
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@GrahamcOfBorg build python2.pkgs.patsy python3.pkgs.patsy python3.pkgs.pymc3

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Success on x86_64-linux (full log)

Attempted: python2.pkgs.patsy, python3.pkgs.patsy, python3.pkgs.pymc3

Partial log (click to expand)

/build/pymc3-3.2
post-installation fixup
shrinking RPATHs of ELF executables and libraries in /nix/store/pdgw0bn12mvfmpc3fdqfdsib2w6bbr7h-python3.6-pymc3-3.2
strip is /nix/store/j75dgadrff2d1fyc4fczmcgqkid2imdx-binutils-2.30/bin/strip
stripping (with command strip and flags -S) in /nix/store/pdgw0bn12mvfmpc3fdqfdsib2w6bbr7h-python3.6-pymc3-3.2/lib
patching script interpreter paths in /nix/store/pdgw0bn12mvfmpc3fdqfdsib2w6bbr7h-python3.6-pymc3-3.2
checking for references to /build in /nix/store/pdgw0bn12mvfmpc3fdqfdsib2w6bbr7h-python3.6-pymc3-3.2...
/nix/store/xgc62i0mwcdgijn1vm1mq1rq0dbm2adn-python2.7-patsy-0.5.0
/nix/store/zc5cv4z63naa0akwg0dpc07r5bdxhm5k-python3.6-patsy-0.5.0
/nix/store/pdgw0bn12mvfmpc3fdqfdsib2w6bbr7h-python3.6-pymc3-3.2

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Failure on aarch64-linux (full log)

Attempted: python2.pkgs.patsy, python3.pkgs.patsy, python3.pkgs.pymc3

Partial log (click to expand)

cannot build derivation '/nix/store/c1irhqx18zhisfsnld9avd4n77z2rq7r-python3.6-docker-3.2.1.drv': 1 dependencies couldn't be built
cannot build derivation '/nix/store/8k10m1ra1ayf7chkvk4hk8iwjz9dh6zj-python3.6-httpretty-0.8.10.drv': 2 dependencies couldn't be built
cannot build derivation '/nix/store/gyl64x7xmvx60nyns9p29ia1vfzcf0s6-python3.6-Flask-0.12.2.drv': 1 dependencies couldn't be built
cannot build derivation '/nix/store/zg763a543d0r6xjwg8wbz7in2yp5axnf-python3.6-boto-2.47.0.drv': 2 dependencies couldn't be built
cannot build derivation '/nix/store/lh6bs57iibssbdani21aldykx04x7sgg-python3.6-numpydoc-0.8.0.drv': 1 dependencies couldn't be built
cannot build derivation '/nix/store/gkpd041bckyjwipj4r7dvgfgiln5awjs-python3.6-joblib-0.11.drv': 2 dependencies couldn't be built
cannot build derivation '/nix/store/l55hkbsd65rs3d4z6cf5vbzv542jzlyw-python3.6-moto-1.3.1.drv': 7 dependencies couldn't be built
cannot build derivation '/nix/store/519jb180ig8gq4w7acfpyb6rp40mzxyc-python3.6-pandas-0.22.0.drv': 6 dependencies couldn't be built
cannot build derivation '/nix/store/b89j6i3kqs7mr0lc766in80c897ny5v3-python3.6-pymc3-3.2.drv': 5 dependencies couldn't be built
�[31;1merror:�[0m build of '/nix/store/2fk083d9l2r1j0763jb0va1fwy5yv5ms-python3.6-patsy-0.5.0.drv', '/nix/store/b89j6i3kqs7mr0lc766in80c897ny5v3-python3.6-pymc3-3.2.drv', '/nix/store/ybcv1j4sz7gndjgz9l3mr731gcx4yl4m-python2.7-patsy-0.5.0.drv' failed

@dotlambda dotlambda merged commit cbc3afc into NixOS:master Apr 29, 2018
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@dotlambda dotlambda dotlambda approved these changes

@FRidh FRidh Awaiting requested review from FRidh

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