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gromacs: 4.6.7 -> 2018 #36582

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merged 1 commit into from Apr 17, 2018
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@ryantm ryantm commented Mar 8, 2018

Semi-automatic update. These checks were done:

  • built on NixOS
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.bash -h got 0 exit code
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.bash --help got 0 exit code
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.bash help got 0 exit code
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.zsh -h got 0 exit code
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.zsh --help got 0 exit code
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.zsh help got 0 exit code
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx -h got 0 exit code
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx help got 0 exit code
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx --version and found version 2018
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx -h and found version 2018
  • ran /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx help and found version 2018
  • found 2018 with grep in /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018

Semi-automatic update. These checks were done:

- built on NixOS
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.bash -h` got 0 exit code
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.bash --help` got 0 exit code
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.bash help` got 0 exit code
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.zsh -h` got 0 exit code
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.zsh --help` got 0 exit code
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/GMXRC.zsh help` got 0 exit code
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx -h` got 0 exit code
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx help` got 0 exit code
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx --version` and found version 2018
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx -h` and found version 2018
- ran `/nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx help` and found version 2018
- found 2018 with grep in /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018
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Success on x86_64-darwin (full log)

Partial log (click to expand)

-- Installing: /nix/store/70bjknx7si5wdx2sfg4iammlzlb1vgbh-gromacs-2018/include/gromacs/trajectoryanalysis/cmdlinerunner.h
-- Installing: /nix/store/70bjknx7si5wdx2sfg4iammlzlb1vgbh-gromacs-2018/bin/gmx
-- Up-to-date: /nix/store/70bjknx7si5wdx2sfg4iammlzlb1vgbh-gromacs-2018/bin
-- Installing: /nix/store/70bjknx7si5wdx2sfg4iammlzlb1vgbh-gromacs-2018/bin/gmx-completion.bash
-- Installing: /nix/store/70bjknx7si5wdx2sfg4iammlzlb1vgbh-gromacs-2018/bin/gmx-completion-gmx.bash
post-installation fixup
gzipping man pages under /nix/store/70bjknx7si5wdx2sfg4iammlzlb1vgbh-gromacs-2018/share/man/
strip is /nix/store/4sdh09gmvl15cy0zb6i7mbvxh5syz206-cctools-binutils-darwin/bin/strip
stripping (with command strip and flags -S) in /nix/store/70bjknx7si5wdx2sfg4iammlzlb1vgbh-gromacs-2018/lib  /nix/store/70bjknx7si5wdx2sfg4iammlzlb1vgbh-gromacs-2018/bin
patching script interpreter paths in /nix/store/70bjknx7si5wdx2sfg4iammlzlb1vgbh-gromacs-2018

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Success on x86_64-linux (full log)

Partial log (click to expand)

-- Installing: /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx-completion-gmx.bash
post-installation fixup
shrinking RPATHs of ELF executables and libraries in /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018
shrinking /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin/gmx
shrinking /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/lib/libgromacs.so.3.0.0
gzipping man pages under /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/share/man/
strip is /nix/store/b0zlxla7dmy1iwc3g459rjznx59797xy-binutils-2.28.1/bin/strip
stripping (with command strip and flags -S) in /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/lib  /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018/bin 
patching script interpreter paths in /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018
checking for references to /tmp/nix-build-gromacs-2018.drv-0 in /nix/store/i2ls9z094j6a3vqvq6gz4hyhl86dh31d-gromacs-2018...

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Success on aarch64-linux (full log)

Partial log (click to expand)

-- Installing: /nix/store/83zh6xyhx0yk9wiga7j55j7lv5gzfrrz-gromacs-2018/bin/gmx-completion-gmx.bash
post-installation fixup
shrinking RPATHs of ELF executables and libraries in /nix/store/83zh6xyhx0yk9wiga7j55j7lv5gzfrrz-gromacs-2018
shrinking /nix/store/83zh6xyhx0yk9wiga7j55j7lv5gzfrrz-gromacs-2018/lib/libgromacs.so.3.0.0
shrinking /nix/store/83zh6xyhx0yk9wiga7j55j7lv5gzfrrz-gromacs-2018/bin/gmx
gzipping man pages under /nix/store/83zh6xyhx0yk9wiga7j55j7lv5gzfrrz-gromacs-2018/share/man/
strip is /nix/store/lvx1acn1ig1j2km8jds5x3ggh3f2wa8v-binutils-2.28.1/bin/strip
stripping (with command strip and flags -S) in /nix/store/83zh6xyhx0yk9wiga7j55j7lv5gzfrrz-gromacs-2018/lib  /nix/store/83zh6xyhx0yk9wiga7j55j7lv5gzfrrz-gromacs-2018/bin
patching script interpreter paths in /nix/store/83zh6xyhx0yk9wiga7j55j7lv5gzfrrz-gromacs-2018
checking for references to /build in /nix/store/83zh6xyhx0yk9wiga7j55j7lv5gzfrrz-gromacs-2018...

@matthewbauer matthewbauer merged commit 1ec5b03 into NixOS:master Apr 17, 2018
@ryantm ryantm deleted the auto-update/gromacs branch April 17, 2018 16:49
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3 participants