Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

singularity: 2.4 -> 2.4.2 #36691

Closed
wants to merge 1 commit into from
Closed

singularity: 2.4 -> 2.4.2 #36691

wants to merge 1 commit into from

Conversation

ryantm
Copy link
Member

@ryantm ryantm commented Mar 9, 2018

Semi-automatic update. These checks were done:

  • built on NixOS
  • ran /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity -h got 0 exit code
  • ran /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity --help got 0 exit code
  • ran /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity help got 0 exit code
  • ran /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity -v and found version 2.4.2
  • ran /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity --version and found version 2.4.2
  • found 2.4.2 with grep in /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2
  • found 2.4.2 in filename of file in /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2

cc @jbedo

@ryantm
singularity: 2.4 -> 2.4.2
37a7896 
Semi-automatic update. These checks were done:

- built on NixOS
- ran `/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity -h` got 0 exit code
- ran `/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity --help` got 0 exit code
- ran `/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity help` got 0 exit code
- ran `/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity -v` and found version 2.4.2
- ran `/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/bin/singularity --version` and found version 2.4.2
- found 2.4.2 with grep in /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2
- found 2.4.2 in filename of file in /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2
@GrahamcOfBorg
Copy link

Failure on x86_64-darwin (full log)

Partial log (click to expand)

Package ‘singularity-2.4.2’ in /Users/graham/nix-borg/repo/38dca4e3aa6bca43ea96d2fcc04e8229/builder/grahamc-ndnd/pkgs/applications/virtualization/singularity/default.nix:53 is not supported on ‘x86_64-darwin’, refusing to evaluate.

a) For `nixos-rebuild` you can set
  { nixpkgs.config.allowBroken = true; }
in configuration.nix to override this.

b) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowBroken = true; }
to ~/.config/nixpkgs/config.nix.

@GrahamcOfBorg
Copy link

Success on x86_64-linux (full log)

Partial log (click to expand)

/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/libexec/singularity/cli/instance.stop.exec: interpreter directive changed from "/bin/bash" to "/nix/store/zqh3l3lyw32q1ayb15bnvg9f24j5v2p0-bash-4.4-p12/bin/bash"
/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/libexec/singularity/cli/image.expand.exec: interpreter directive changed from "/bin/bash" to "/nix/store/zqh3l3lyw32q1ayb15bnvg9f24j5v2p0-bash-4.4-p12/bin/bash"
/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/libexec/singularity/cli/help.exec: interpreter directive changed from "/bin/bash" to "/nix/store/zqh3l3lyw32q1ayb15bnvg9f24j5v2p0-bash-4.4-p12/bin/bash"
/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/libexec/singularity/cli/check.exec: interpreter directive changed from "/bin/bash" to "/nix/store/zqh3l3lyw32q1ayb15bnvg9f24j5v2p0-bash-4.4-p12/bin/bash"
/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/libexec/singularity/helpers/check.sh: interpreter directive changed from "/bin/bash" to "/nix/store/zqh3l3lyw32q1ayb15bnvg9f24j5v2p0-bash-4.4-p12/bin/bash"
/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/libexec/singularity/helpers/help.sh: interpreter directive changed from "/bin/bash" to "/nix/store/zqh3l3lyw32q1ayb15bnvg9f24j5v2p0-bash-4.4-p12/bin/bash"
/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/libexec/singularity/helpers/inspect.sh: interpreter directive changed from "/bin/bash" to "/nix/store/zqh3l3lyw32q1ayb15bnvg9f24j5v2p0-bash-4.4-p12/bin/bash"
/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/libexec/singularity/helpers/image.sh: interpreter directive changed from "/bin/bash" to "/nix/store/zqh3l3lyw32q1ayb15bnvg9f24j5v2p0-bash-4.4-p12/bin/bash"
/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/libexec/singularity/helpers/apps/list.sh: interpreter directive changed from "/bin/bash" to "/nix/store/zqh3l3lyw32q1ayb15bnvg9f24j5v2p0-bash-4.4-p12/bin/bash"
/nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2

@GrahamcOfBorg
Copy link

Success on aarch64-linux (full log)

Partial log (click to expand)

/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2/libexec/singularity/bootstrap-scripts/deffile-driver-localimage.sh: interpreter directive changed from "/bin/bash" to "/nix/store/lnws52qanbi5vz8qg24v4ym57nznfndg-bash-4.4-p12/bin/bash"
/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2/libexec/singularity/bootstrap-scripts/deffile-driver-docker.sh: interpreter directive changed from "/bin/bash" to "/nix/store/lnws52qanbi5vz8qg24v4ym57nznfndg-bash-4.4-p12/bin/bash"
/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2/libexec/singularity/bootstrap-scripts/deffile-driver-debootstrap.sh: interpreter directive changed from "/bin/bash" to "/nix/store/lnws52qanbi5vz8qg24v4ym57nznfndg-bash-4.4-p12/bin/bash"
/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2/libexec/singularity/bootstrap-scripts/deffile-driver-busybox.sh: interpreter directive changed from "/bin/bash" to "/nix/store/lnws52qanbi5vz8qg24v4ym57nznfndg-bash-4.4-p12/bin/bash"
/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2/libexec/singularity/bootstrap-scripts/deffile-driver-arch.sh: interpreter directive changed from "/bin/bash" to "/nix/store/lnws52qanbi5vz8qg24v4ym57nznfndg-bash-4.4-p12/bin/bash"
/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2/libexec/singularity/bootstrap-scripts/checks.sh: interpreter directive changed from "/bin/bash" to "/nix/store/lnws52qanbi5vz8qg24v4ym57nznfndg-bash-4.4-p12/bin/bash"
/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2/libexec/singularity/bootstrap-scripts/functions: interpreter directive changed from "/bin/bash" to "/nix/store/lnws52qanbi5vz8qg24v4ym57nznfndg-bash-4.4-p12/bin/bash"
/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2/bin/run-singularity: interpreter directive changed from "/bin/sh" to "/nix/store/lnws52qanbi5vz8qg24v4ym57nznfndg-bash-4.4-p12/bin/sh"
/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2/bin/singularity: interpreter directive changed from "/bin/bash" to "/nix/store/lnws52qanbi5vz8qg24v4ym57nznfndg-bash-4.4-p12/bin/bash"
/nix/store/s1qadgbscd3hn9ywnz6c15rc50m35ksr-singularity-2.4.2

@jbedo
Copy link
Contributor

jbedo commented Mar 9, 2018

This breaks image building as mnt/container is not owned by root:

`Singularity: mount (U=0,P=3105)> Root must own container mount directory: /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/var/singularity/mnt/container

ERROR : Root must own container mount directory: /nix/store/64n6qi39xvh6jvi7qzpkfxpq1d57xw45-singularity-2.4.2/var/singularity/mnt/container
Singularity: mount (U=0,P=3105)> Retval = 255

ABORT : Retval = 255
`

@jbedo jbedo mentioned this pull request Mar 12, 2018
Merged
8 tasks
@joachifm joachifm closed this Mar 14, 2018
@ryantm ryantm deleted the auto-update/singularity branch March 14, 2018 21:33
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers
No reviews
Assignees
No one assigned
Labels
10.rebuild-darwin: 0 10.rebuild-linux: 1-10
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.

None yet
4 participants
@ryantm @GrahamcOfBorg @jbedo @joachifm