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Commits on May 2, 2017

• Release 1.5.15

  johnmay

  committedMay 2, 2017
  2b3f09f

• Merge pull request #309 from cdk/patch/apicleanup2

  egonw

  committedMay 2, 2017
  20e33fb

• getBegin() rather than getBeg()

  johnmay

  committedMay 2, 2017
  1c315b6

• Tidy JavaDoc

  johnmay

  committedMay 2, 2017
  a2ee980

• Remove redundant access modifiers.

  johnmay

  committedMay 2, 2017
  e482aec

• Format javadoc.

  johnmay

  committedMay 2, 2017
  0849272

• Remaining usage cleanup.

  johnmay

  committedMay 2, 2017
  96ad1ee

• Use the getBeg() and getEnd() methods for first two atoms.

  johnmay

  committedMay 2, 2017
  1787b30

• More efficient access of n-centre connected atoms. One traversal, no memcpy (List[]->IAtom[]).

  johnmay

  committedMay 2, 2017
  5f83800

• New getOther replaces getConnectedAtom with a more concise name.

  johnmay

  committedMay 2, 2017
  f7a922e

• Remove redundant access modifiers.

  johnmay

  committedMay 2, 2017
  50421b6

• More usage in the library.

  johnmay

  committedMay 2, 2017
  47f9841

• Simple Beg/End usage updates.

  johnmay

  committedMay 2, 2017
  ebf088f

• Add convenience methods to access the 'begin' and 'end' atoms.

  johnmay

  committedMay 2, 2017
  722f9d3

• setAtom should also remove listener

  johnmay

  committedMay 2, 2017
  3e651a9

• setBonds should notify on removal, also iterate till atomCount rather than the whole array

  johnmay

  committedMay 2, 2017
  ab911da

Commits on May 1, 2017

• Remove STDOUT print from test

  johnmay

  committedMay 1, 2017
  d7faef6

• Merge pull request #308 from gilleain/groupRefactor

  johnmay

  committedMay 1, 2017
  603e7f8

Commits on Apr 30, 2017

• Merge pull request #303 from cdk/patch/fpversion

  egonw

  committedApr 30, 2017
  b616a1a

• Merge pull request #311 from cdk/patch/beamconvspeedup

  egonw

  committedApr 30, 2017
  3d566b8

• Report a version/param description for fingerprints.

  johnmay

  committedApr 30, 2017
  5995e07

• Increase default path limit, with optimisations we can now encode this molecule in under a second.

  johnmay

  committedApr 30, 2017
  05d316d

• Cache CDK Library Version

  johnmay

  committedApr 30, 2017
  dc4bd19

• Fix test regressions, I thought setSymbol also sets the atomic number - it does not.

  johnmay

  committedApr 30, 2017
  6e60cdd

• Split into public and package-protected classes, and a factory for refiners

  gilleain

  committedApr 30, 2017
  25fefef

• Lift the bond creation out of the method allow us to set the bond order, aromatic flags, and whether to check bond stereo all at the same time.

  johnmay

  committedApr 30, 2017
  28a46c6

• Tweak Beam->CDK conversion to do less work. Copying the stereochemistry need not be done if there is no stereochemistry.

  johnmay

  committedApr 30, 2017
  c5631ea

Commits on Apr 29, 2017

• Merge pull request #310 from cdk/patch/factorymalloc

  egonw

  committedApr 29, 2017
  10a0417

• Use faster factory methods in V3000 reader.

  johnmay

  committedApr 29, 2017
  f4f069c

• Use fast object instantiation in MDLV2000 reader

  johnmay

  committedApr 29, 2017
  af88925

• Use new factory methods for faster Beam->CDK conversion.

  johnmay

  committedApr 29, 2017
  0444328

• Provide direct access to default constructors for "Hot" objects.

  johnmay

  committedApr 29, 2017
  77fe4c7

Commits on Apr 28, 2017

• Extra tests to check equitable partition

  gilleain

  committedApr 28, 2017
  b7ec3f1

• Fixup the copyright, add a missing test, and use indexOf instead of deprecated getAtomNumber

  gilleain

  committedApr 28, 2017
  91ab7a7

• Missing inheritdoc

  gilleain

  committedApr 28, 2017
  3d1f504

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