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ants: bump version and fix sandboxed build #29538

Merged
merged 1 commit into from Sep 21, 2017
Merged

ants: bump version and fix sandboxed build #29538

merged 1 commit into from Sep 21, 2017

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bcdarwin
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@bcdarwin bcdarwin commented Sep 18, 2017 •
edited

Motivation for this change
  • fix sandboxed build failure;
  • bump version

for 17.09 release (#28643)

Things done
  • Tested using sandboxing (nix.useSandbox on NixOS, or option build-use-sandbox in nix.conf on non-NixOS)
  • Built on platform(s)
    • NixOS
    • macOS
    • Linux
  • [NA] Tested via one or more NixOS test(s) if existing and applicable for the change (look inside nixos/tests)
  • [NA] Tested compilation of all pkgs that depend on this change using nix-shell -p nox --run "nox-review wip"
  • Tested execution of all binary files (usually in ./result/bin/)
  • Fits CONTRIBUTING.md.

@fpletz fpletz added this to the 17.09 milestone Sep 18, 2017
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fpletz commented Sep 19, 2017

Fails to build for me:

[ 98%] Linking CXX executable CompositeTransformUtilTestDriver
[ 98%] Built target CompositeTransformUtilTestDriver
Scanning dependencies of target ANTSFetchData
[ 98%] Generating /tmp/nix-build-ANTs-2.2.0.drv-0/ANTs-37ad4e20be3a5ecd26c2e4e41b49e778a0246c3d-src/build/ExternalData/TestData/Data/r16slice.nii.gz
-- Fetching "file:////tmp/nix-build-ANTs-2.2.0.drv-0/ANTs-37ad4e20be3a5ecd26c2e4e41b49e778a0246c3d-src/.ExternalData/MD5/37aaa33029410941bf4affff0479fa18"
-- Fetching "http://slicer.kitware.com/midas3/api/rest?method=midas.bitstream.download&checksum=37aaa33029410941bf4affff0479fa18"
-- Fetching "http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=37aaa33029410941bf4affff0479fa18&algorithm=MD5"
-- Fetching "http://www.itk.org/files/ExternalData/MD5/37aaa33029410941bf4affff0479fa18"
CMake Error at /tmp/nix-build-ANTs-2.2.0.drv-0/ANTs-37ad4e20be3a5ecd26c2e4e41b49e778a0246c3d-src/CMake/ExternalData.cmake:743 (message):
  Object MD5=37aaa33029410941bf4affff0479fa18 not found at:

    file:////tmp/nix-build-ANTs-2.2.0.drv-0/ANTs-37ad4e20be3a5ecd26c2e4e41b49e778a0246c3d-src/.ExternalData/MD5/37aaa33029410941bf4affff0479fa18 ("Couldn't read a file:// file")
    http://slicer.kitware.com/midas3/api/rest?method=midas.bitstream.download&checksum=37aaa33029410941bf4affff0479fa18 ("Couldn't resolve host name")
    http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=37aaa33029410941bf4affff0479fa18&algorithm=MD5 ("Couldn't resolve host name")
    http://www.itk.org/files/ExternalData/MD5/37aaa33029410941bf4affff0479fa18 ("Couldn't resolve host name")
Call Stack (most recent call first):
  /tmp/nix-build-ANTs-2.2.0.drv-0/ANTs-37ad4e20be3a5ecd26c2e4e41b49e778a0246c3d-src/CMake/ExternalData.cmake:765 (_ExternalData_download_object)


make[2]: *** [Examples/TestSuite/CMakeFiles/ANTSFetchData.dir/build.make:68: ExternalData/TestData/Data/r16slice.nii.gz.md5-stamp] Error 1
make[1]: *** [CMakeFiles/Makefile2:9377: Examples/TestSuite/CMakeFiles/ANTSFetchData.dir/all] Error 2
make: *** [Makefile:163: all] Error 2
builder for ‘/nix/store/29vmlr8fp39l9z9w0cn6d2np5ikki2j7-ANTs-2.2.0.drv’ failed with exit code 2
error: build of ‘/nix/store/29vmlr8fp39l9z9w0cn6d2np5ikki2j7-ANTs-2.2.0.drv’ failed

@bcdarwin
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@fpletz Should be fixed now, sorry.

@joachifm joachifm merged commit 44d2eaa into NixOS:master Sep 21, 2017
@bcdarwin bcdarwin deleted the update-and-fix-ANTS branch September 21, 2017 22:09
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