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Merged
merged 1 commit into from
Oct 24, 2018
Merged

python36Packages.nipy: 0.4.0 -> 0.4.2 #48973

merged 1 commit into from
Oct 24, 2018
+2 −2

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r-ryantm
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Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/python3.6-nipy/versions.

meta.description for python36Packages.nipy is: '"Software for structural and functional neuroimaging analysis"'.

Checks done (click to expand)
  • built on NixOS
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/.nipy_3dto4d-wrapped passed the binary check.
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_3dto4d passed the binary check.
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/.nipy_4d_realign-wrapped passed the binary check.
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_4d_realign passed the binary check.
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/.nipy_4dto3d-wrapped passed the binary check.
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_4dto3d passed the binary check.
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/.nipy_diagnose-wrapped passed the binary check.
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_diagnose passed the binary check.
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/.nipy_tsdiffana-wrapped passed the binary check.
  • /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_tsdiffana passed the binary check.
  • 10 of 10 passed binary check by having a zero exit code.
  • 0 of 10 passed binary check by having the new version present in output.
  • found 0.4.2 with grep in /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2
  • directory tree listing: https://gist.github.com/d435b91f71497a0f69b1056a4f4227e5
  • du listing: https://gist.github.com/264d96ca429f5450ed74ecd288fee323
Outpath report (click to expand)

Outpath difference report
8 total rebuild paths

2 package rebuilds

2 x86_64-linux rebuilds
2 i686-linux rebuilds
2 x86_64-darwin rebuilds
2 aarch64-linux rebuilds

First ten rebuilds by attrpath
python27Packages.nipy
python36Packages.nipy

Instructions to test this update (click to expand)

Either download from Cachix:

nix-store -r /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2 \
  --option binary-caches 'https://cache.nixos.org/ https://r-ryantm.cachix.org/' \
  --option trusted-public-keys '
  r-ryantm.cachix.org-1:gkUbLkouDAyvBdpBX0JOdIiD2/DP1ldF3Z3Y6Gqcc4c=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(r-ryantm's Cachix cache is only trusted for this store-path realization.)

Or, build yourself:

nix-build -A python36Packages.nipy https://github.com/r-ryantm/nixpkgs/archive/4c687d3e1b18f693ef3ec3fe5fdabc8da537aee5.tar.gz

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2
ls -la /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin

@r-ryantm
python36Packages.nipy: 0.4.0 -> 0.4.2
4c687d3 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/python3.6-nipy/versions
@r-ryantm r-ryantm requested a review from FRidh as a code owner October 24, 2018 08:33
@GrahamcOfBorg
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Success on aarch64-linux (full log)

Attempted: python36Packages.nipy

Partial log (click to expand)

strip is /nix/store/p9akxn2sfy4wkhqdqa3li97pc6jaz3r1-binutils-2.30/bin/strip
stripping (with command strip and flags -S) in /nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2/lib  /nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2/bin
patching script interpreter paths in /nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2
checking for references to /build in /nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2...
wrapping `/nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2/bin/nipy_3dto4d'...
wrapping `/nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2/bin/nipy_4d_realign'...
wrapping `/nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2/bin/nipy_4dto3d'...
wrapping `/nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2/bin/nipy_diagnose'...
wrapping `/nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2/bin/nipy_tsdiffana'...
/nix/store/yhkhzgr9qpjc99r3h3qx80d3yicwnq9n-python3.6-nipy-0.4.2

@GrahamcOfBorg
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Success on x86_64-linux (full log)

Attempted: python36Packages.nipy

Partial log (click to expand)

shrinking /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/lib/python3.6/site-packages/nipy/algorithms/registration/_registration.cpython-36m-x86_64-linux-gnu.so
strip is /nix/store/vcc4svb8gy29g4pam2zja6llkbcwsyiq-binutils-2.30/bin/strip
stripping (with command strip and flags -S) in /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/lib  /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin
patching script interpreter paths in /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2
checking for references to /build in /nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2...
wrapping `/nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_diagnose'...
wrapping `/nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_4d_realign'...
wrapping `/nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_tsdiffana'...
wrapping `/nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_4dto3d'...
wrapping `/nix/store/j7s43868zizh53sp2xh3kvjmbj5zswi5-python3.6-nipy-0.4.2/bin/nipy_3dto4d'...

@GrahamcOfBorg
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Timed out, unknown build status on x86_64-darwin (full log)

Attempted: python36Packages.nipy

Partial log (click to expand)

../numpy/lib/tests/test_format.py::test_large_header <- ../../../../nix/store/wd6nr3a4am08clb3jizca9451dhbkr09-python3.6-numpy-1.15.2/lib/python3.6/site-packages/numpy/lib/tests/test_format.py PASSED [ 52%]
../numpy/lib/tests/test_format.py::test_read_array_header_1_0 <- ../../../../nix/store/wd6nr3a4am08clb3jizca9451dhbkr09-python3.6-numpy-1.15.2/lib/python3.6/site-packages/numpy/lib/tests/test_format.py PASSED [ 52%]
../numpy/lib/tests/test_format.py::test_read_array_header_2_0 <- ../../../../nix/store/wd6nr3a4am08clb3jizca9451dhbkr09-python3.6-numpy-1.15.2/lib/python3.6/site-packages/numpy/lib/tests/test_format.py PASSED [ 52%]
../numpy/lib/tests/test_format.py::test_bad_header <- ../../../../nix/store/wd6nr3a4am08clb3jizca9451dhbkr09-python3.6-numpy-1.15.2/lib/python3.6/site-packages/numpy/lib/tests/test_format.py PASSED [ 52%]
building of '/nix/store/a325qb4rsb6w30pp2l9qzxdasry14zi9-python3.6-numpy-1.15.2.drv' timed out after 1800 seconds
cannot build derivation '/nix/store/mbfywgl1sh5532k7i1g0l59zfsnsjffy-python3.6-matplotlib-2.2.3.drv': 3 dependencies couldn't be built
cannot build derivation '/nix/store/frq1cpwrrzw6szj10y1xyh01v7la4jbn-python3.6-nibabel-2.3.0.drv': 1 dependencies couldn't be built
cannot build derivation '/nix/store/5dm1i908szra6mr8bwwbhrv81isbcjx5-python3.6-scipy-1.1.0.drv': 1 dependencies couldn't be built
cannot build derivation '/nix/store/1x99ajkqs8wrsppzg24xn7ys8pqranar-python3.6-nipy-0.4.2.drv': 4 dependencies couldn't be built
error: build of '/nix/store/1x99ajkqs8wrsppzg24xn7ys8pqranar-python3.6-nipy-0.4.2.drv' failed

@xeji
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xeji commented Oct 24, 2018

@GrahamcOfBorg build python27Packages.nipy

@GrahamcOfBorg
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Success on aarch64-linux (full log)

Attempted: python27Packages.nipy

Partial log (click to expand)

shrinking /nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2/lib/python2.7/site-packages/nipy/labs/utils/routines.so
strip is /nix/store/p9akxn2sfy4wkhqdqa3li97pc6jaz3r1-binutils-2.30/bin/strip
stripping (with command strip and flags -S) in /nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2/lib  /nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2/bin
patching script interpreter paths in /nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2
checking for references to /build in /nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2...
wrapping `/nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2/bin/nipy_3dto4d'...
wrapping `/nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2/bin/nipy_4d_realign'...
wrapping `/nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2/bin/nipy_4dto3d'...
wrapping `/nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2/bin/nipy_diagnose'...
wrapping `/nix/store/pdygqgn5f3jph9yr0ki0b08z64nd8qg2-python2.7-nipy-0.4.2/bin/nipy_tsdiffana'...

@GrahamcOfBorg
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Success on x86_64-linux (full log)

Attempted: python27Packages.nipy

Partial log (click to expand)

shrinking /nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2/lib/python2.7/site-packages/nipy/algorithms/registration/_registration.so
strip is /nix/store/vcc4svb8gy29g4pam2zja6llkbcwsyiq-binutils-2.30/bin/strip
stripping (with command strip and flags -S) in /nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2/lib  /nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2/bin
patching script interpreter paths in /nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2
checking for references to /build in /nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2...
wrapping `/nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2/bin/nipy_diagnose'...
wrapping `/nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2/bin/nipy_4d_realign'...
wrapping `/nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2/bin/nipy_tsdiffana'...
wrapping `/nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2/bin/nipy_4dto3d'...
wrapping `/nix/store/jpcn3ih8j89i4k0111d8yrl1m67mb9h6-python2.7-nipy-0.4.2/bin/nipy_3dto4d'...

@GrahamcOfBorg
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Timed out, unknown build status on x86_64-darwin (full log)

Attempted: python27Packages.nipy

Partial log (click to expand)

Requirement already satisfied: setuptools in /nix/store/m5pdr0h09xljb83z1hwh3bbj355pn6zb-python2.7-bootstrapped-pip-18.1/lib/python2.7/site-packages (from kiwisolver>=1.0.1->matplotlib==2.2.3) (40.4.3)
Installing collected packages: matplotlib
Successfully installed matplotlib-2.2.3
/private/tmp/nix-build-python2.7-matplotlib-2.2.3.drv-0/matplotlib-2.2.3
post-installation fixup
strip is /nix/store/g5r4apl0za012ffs6ladinwa5w0m1l3k-cctools-binutils-darwin/bin/strip
stripping (with command strip and flags -S) in /nix/store/ff968gxyfiybrylwb22kfs2sq70wdz0f-python2.7-matplotlib-2.2.3/lib
patching script interpreter paths in /nix/store/ff968gxyfiybrylwb22kfs2sq70wdz0f-python2.7-matplotlib-2.2.3
cannot build derivation '/nix/store/884vn9l2w38sdrl7z0srra6yhq7zwpfx-python2.7-nipy-0.4.2.drv': 1 dependencies couldn't be built
error: build of '/nix/store/884vn9l2w38sdrl7z0srra6yhq7zwpfx-python2.7-nipy-0.4.2.drv' failed

@FRidh FRidh merged commit 74bed8a into NixOS:master Oct 24, 2018
@r-ryantm r-ryantm deleted the auto-update/python3.6-nipy branch November 17, 2018 23:05
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@r-ryantm @GrahamcOfBorg @xeji @FRidh