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Sage refactor #50998

Merged
merged 6 commits into from Nov 24, 2018
Merged

Sage refactor #50998

merged 6 commits into from Nov 24, 2018

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timokau
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@timokau timokau commented Nov 24, 2018

Motivation for this change
  • cleanup the sage package
  • make it more clear which file is responsible for what, improve naming
  • make tests accessible for debugging
  • other misc changes
Things done
  • Tested using sandboxing (nix.useSandbox on NixOS, or option sandbox in nix.conf on non-NixOS)
  • Built on platform(s)
    • NixOS
    • macOS
    • other Linux distributions
  • Tested via one or more NixOS test(s) if existing and applicable for the change (look inside nixos/tests)
  • Tested compilation of all pkgs that depend on this change using nix-shell -p nox --run "nox-review wip"
  • Tested execution of all binary files (usually in ./result/bin/)
  • Determined the impact on package closure size (by running nix path-info -S before and after)
  • Assured whether relevant documentation is up to date
  • Fits CONTRIBUTING.md.

@timokau
sage: drop unused patches
ca6475b
@timokau
sage: drop known-padics-failure patch
9b4a518 
The failure was not observed for a while and is probably fixed now.
@timokau
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timokau commented Nov 24, 2018

@GrahamcOfBorg build "sage.tests.override { longTests = false; }"

@GrahamcOfBorg
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No attempt on aarch64-linux (full log)

The following builds were skipped because they don't evaluate on aarch64-linux: "sage.tests.override, {, longTests, =, false;, }"

Partial log (click to expand)


Cannot nix-instantiate `=' because:
error: attribute '=' in selection path '=' not found

Cannot nix-instantiate `false;' because:
error: attribute 'false;' in selection path 'false;' not found

Cannot nix-instantiate `}"' because:
error: missing closing quote in selection path '}"'

@GrahamcOfBorg
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No attempt on x86_64-darwin (full log)

The following builds were skipped because they don't evaluate on x86_64-darwin: "sage.tests.override, {, longTests, =, false;, }"

Partial log (click to expand)


Cannot nix-instantiate `=' because:
error: attribute '=' in selection path '=' not found

Cannot nix-instantiate `false;' because:
error: attribute 'false;' in selection path 'false;' not found

Cannot nix-instantiate `}"' because:
error: missing closing quote in selection path '}"'

@GrahamcOfBorg
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No attempt on x86_64-linux (full log)

The following builds were skipped because they don't evaluate on x86_64-linux: "sage.tests.override, {, longTests, =, false;, }"

Partial log (click to expand)


Cannot nix-instantiate `=' because:
error: attribute '=' in selection path '=' not found

Cannot nix-instantiate `false;' because:
error: attribute 'false;' in selection path 'false;' not found

Cannot nix-instantiate `}"' because:
error: missing closing quote in selection path '}"'

@GrahamcOfBorg
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No attempt on x86_64-darwin (full log)

The following builds were skipped because they don't evaluate on x86_64-darwin: sage

Partial log (click to expand)


a) For `nixos-rebuild` you can set
  { nixpkgs.config.allowUnsupportedSystem = true; }
in configuration.nix to override this.

b) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowUnsupportedSystem = true; }
to ~/.config/nixpkgs/config.nix.

@GrahamcOfBorg
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No attempt on aarch64-linux (full log)

The following builds were skipped because they don't evaluate on aarch64-linux: sage

Partial log (click to expand)


a) For `nixos-rebuild` you can set
  { nixpkgs.config.allowUnfree = true; }
in configuration.nix to override this.

b) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowUnfree = true; }
to ~/.config/nixpkgs/config.nix.

@timokau
sage: refactor
3832dde
@timokau
sage: remove openblas hack
21f9123 
The pc files have since been included into the openblas package.
@timokau
sage: add some flexibility to the test runner
e28a8ed 
Make it possible to run individual tests. This is very useful while
git-bisecting.
@timokau
sage: don't fix node version
a0723f1
@GrahamcOfBorg
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No attempt on x86_64-darwin (full log)

The following builds were skipped because they don't evaluate on x86_64-darwin: sage

Partial log (click to expand)


a) For `nixos-rebuild` you can set
  { nixpkgs.config.allowUnsupportedSystem = true; }
in configuration.nix to override this.

b) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowUnsupportedSystem = true; }
to ~/.config/nixpkgs/config.nix.

@GrahamcOfBorg
Copy link

No attempt on aarch64-linux (full log)

The following builds were skipped because they don't evaluate on aarch64-linux: sage

Partial log (click to expand)


a) For `nixos-rebuild` you can set
  { nixpkgs.config.allowUnfree = true; }
in configuration.nix to override this.

b) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowUnfree = true; }
to ~/.config/nixpkgs/config.nix.

@timokau timokau merged commit 0c23fa9 into NixOS:master Nov 24, 2018
@timokau timokau deleted the sage-refactor branch November 24, 2018 22:59
@GrahamcOfBorg
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Timed out, unknown build status on x86_64-linux (full log)

Attempted: sage

Partial log (click to expand)

 static void mpz_to_ZZ(struct ZZ* output, mpz_srcptr x)
             ^~~~~~~~~
g++ -pthread -shared -lgcc_s build/temp.linux-x86_64-2.7/build/cythonized/sage/libs/ntl/ntl_lzz_pContext.o -L/build/sage-src-8.4/lib -L/nix/store/irrwwhym6v41phf2707jb8nccf6jzai3-python-2.7.15/lib -lntl -lgmp -lm -lstdc++ -lpython2.7 -o build/lib.linux-x86_64-2.7/sage/libs/ntl/ntl_lzz_pContext.so -lpari
building of '/nix/store/ji4jkikwdl2723aisakbwijhkkx7av49-python2.7-sagelib-8.4.drv' timed out after 3600 seconds
cannot build derivation '/nix/store/66hhhzs4xhs6n80l0m3avn4ifijpcspb-python-2.7.15-env.drv': 1 dependencies couldn't be built
cannot build derivation '/nix/store/iwnyn2iyxqk6b3wm80w3r080cviwmim9-sage-env.drv': 2 dependencies couldn't be built
cannot build derivation '/nix/store/xldrgsf9cnvyrwkrnbyhncxyh0dwn6zf-sage-with-env-8.4.drv': 2 dependencies couldn't be built
cannot build derivation '/nix/store/ab3pzhz8n3c0l63g4yznhiihw7an3053-sage-tests-8.4.drv': 1 dependencies couldn't be built
cannot build derivation '/nix/store/bxj63ipkgbqz834izspnhiy3d09ngpa1-sage-8.4.drv': 2 dependencies couldn't be built
error: build of '/nix/store/bxj63ipkgbqz834izspnhiy3d09ngpa1-sage-8.4.drv' failed

@GrahamcOfBorg
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Timed out, unknown build status on x86_64-linux (full log)

Attempted: sage

Partial log (click to expand)

    [41 tests, 0.03 s]
sage -t --long /nix/store/fbsf0hqqqj1qj5wxj5mr2n5658f2nzy4-sage-src-8.4/src/sage/misc/sage_input.py
    [735 tests, 0.29 s]
sage -t --long /nix/store/fbsf0hqqqj1qj5wxj5mr2n5658f2nzy4-sage-src-8.4/src/sage/misc/sage_timeit.py
    [44 tests, 1.08 s]
sage -t --long /nix/store/fbsf0hqqqj1qj5wxj5mr2n5658f2nzy4-sage-src-8.4/src/sage/misc/sage_unittest.py
    [88 tests, 0.45 s]
building of '/nix/store/ab3pzhz8n3c0l63g4yznhiihw7an3053-sage-tests-8.4.drv' timed out after 1800 seconds
cannot build derivation '/nix/store/bxj63ipkgbqz834izspnhiy3d09ngpa1-sage-8.4.drv': 1 dependencies couldn't be built
error: build of '/nix/store/bxj63ipkgbqz834izspnhiy3d09ngpa1-sage-8.4.drv' failed

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