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python37Packages.biopython: 1.73 -> 1.74 #66025

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merged 1 commit into from Aug 7, 2019

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r-ryantm
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@r-ryantm r-ryantm commented Aug 5, 2019

Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/python3.7-biopython/versions.

meta.description for python37Packages.biopython is: '"Python library for bioinformatics"'.

meta.homepage for python37Packages.biopython is: '"https://biopython.org/wiki/Documentation"

Checks done (click to expand)
Rebuild report (if merged into master) (click to expand)

12 total rebuild path(s)

3 package rebuild(s)

3 x86_64-linux rebuild(s)
3 i686-linux rebuild(s)
3 x86_64-darwin rebuild(s)
3 aarch64-linux rebuild(s)

First fifty rebuilds by attrpath
eggnog-mapper
python27Packages.biopython
python37Packages.biopython

Instructions to test this update (click to expand)

Either download from Cachix:

nix-store -r /nix/store/pjfn4grslf683pcblwranfsmcbwd37ns-python3.7-biopython-1.74 \
  --option binary-caches 'https://cache.nixos.org/ https://r-ryantm.cachix.org/' \
  --option trusted-public-keys '
  r-ryantm.cachix.org-1:gkUbLkouDAyvBdpBX0JOdIiD2/DP1ldF3Z3Y6Gqcc4c=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(r-ryantm's Cachix cache is only trusted for this store-path realization.)

Or, build yourself:

nix-build -A python37Packages.biopython https://github.com/r-ryantm/nixpkgs/archive/2f85d3591f75aa3d5fb9f9ff5b5e98d6a3844f20.tar.gz

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/pjfn4grslf683pcblwranfsmcbwd37ns-python3.7-biopython-1.74
ls -la /nix/store/pjfn4grslf683pcblwranfsmcbwd37ns-python3.7-biopython-1.74/bin

cc @luispedro for testing.

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nix-review passes on NixOS
diff LGTM
binaries seem to work (just did --help)

@luispedro
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LGTM

@ryantm ryantm merged commit 5761290 into NixOS:master Aug 7, 2019
@r-ryantm r-ryantm deleted the auto-update/python3.7-biopython branch August 17, 2019 13:53
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4 participants