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paml: 4.9h -> 4.9i #57354

Merged
merged 1 commit into from Mar 27, 2019
Merged

paml: 4.9h -> 4.9i #57354

merged 1 commit into from Mar 27, 2019

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r-ryantm
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Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/paml/versions.

meta.description for paml is: '"Phylogenetic Analysis by Maximum Likelihood (PAML)"'.

Checks done (click to expand)
  • built on NixOS
  • Warning: no invocation of /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i/bin/codeml had a zero exit code or showed the expected version
  • Warning: no invocation of /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i/bin/baseml had a zero exit code or showed the expected version
  • Warning: no invocation of /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i/bin/basemlg had a zero exit code or showed the expected version
  • /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i/bin/chi2 passed the binary check.
  • Warning: no invocation of /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i/bin/evolver had a zero exit code or showed the expected version
  • Warning: no invocation of /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i/bin/mcmctree had a zero exit code or showed the expected version
  • Warning: no invocation of /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i/bin/pamp had a zero exit code or showed the expected version
  • Warning: no invocation of /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i/bin/yn00 had a zero exit code or showed the expected version
  • 1 of 8 passed binary check by having a zero exit code.
  • 0 of 8 passed binary check by having the new version present in output.
  • found 4.9i with grep in /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i
  • directory tree listing: https://gist.github.com/fb0c02c8a6f79a52bc7a7fb53b003b71
  • du listing: https://gist.github.com/419dbb97c33d11f9801fbbd1cd110bd0
Rebuild report (if merged into master) (click to expand)

1 total rebuild path(s)

1 package rebuild(s)

1 x86_64-linux rebuild(s)
0 i686-linux rebuild(s)
0 x86_64-darwin rebuild(s)
0 aarch64-linux rebuild(s)

First fifty rebuilds by attrpath
paml

Instructions to test this update (click to expand)

Either download from Cachix:

nix-store -r /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i \
  --option binary-caches 'https://cache.nixos.org/ https://r-ryantm.cachix.org/' \
  --option trusted-public-keys '
  r-ryantm.cachix.org-1:gkUbLkouDAyvBdpBX0JOdIiD2/DP1ldF3Z3Y6Gqcc4c=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(r-ryantm's Cachix cache is only trusted for this store-path realization.)

Or, build yourself:

nix-build -A paml https://github.com/r-ryantm/nixpkgs/archive/58aff1cdb86651a8decb0bc3f76caebf902248f8.tar.gz

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i
ls -la /nix/store/swslh6152y4qk5sc4chp2yz006m3j7fw-paml-4.9i/bin

Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/paml/versions
@xeji xeji merged commit 1b73fd1 into NixOS:master Mar 27, 2019
@r-ryantm r-ryantm deleted the auto-update/paml branch March 31, 2019 02:48
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3 participants