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openmpi: 3.1.3 -> 4.0.0 #55232

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@r-ryantm r-ryantm commented Feb 4, 2019

Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/openmpi/versions.

meta.description for openmpi is: '"Open source MPI-3 implementation"'.

Checks done (click to expand)
  • built on NixOS
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/ortecc passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/mpirun passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/mpiexec passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/ompi-clean passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/ompi-server passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/mpicc passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/mpic++ passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/mpicxx passed the binary check.
  • Warning: no invocation of /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/mpifort had a zero exit code or showed the expected version
  • Warning: no invocation of /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/mpif77 had a zero exit code or showed the expected version
  • Warning: no invocation of /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/mpif90 had a zero exit code or showed the expected version
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/mpiCC passed the binary check.
  • Warning: no invocation of /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/opal_wrapper had a zero exit code or showed the expected version
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/orte-clean passed the binary check.
  • Warning: no invocation of /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/orted had a zero exit code or showed the expected version
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/orterun passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/orte-info passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/orte-server passed the binary check.
  • /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin/ompi_info passed the binary check.
  • 14 of 19 passed binary check by having a zero exit code.
  • 0 of 19 passed binary check by having the new version present in output.
  • found 4.0.0 with grep in /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0
  • directory tree listing: https://gist.github.com/4a3f6f29f765c5f9996fcdb07617c149
  • du listing: https://gist.github.com/ead6fa2af2b40d655952b9ce1a1634fd
Rebuild report (if merged into master) (click to expand)

109 total rebuild path(s)

33 package rebuild(s)

33 x86_64-linux rebuild(s)
28 i686-linux rebuild(s)
20 x86_64-darwin rebuild(s)
28 aarch64-linux rebuild(s)

First fifty rebuilds by attrpath
cntk
dl-poly-classic-mpi
freecad
getdp
globalarrays
gromacsDoubleMpi
gromacsMpi
haskellPackages.haskell-mpi
hdf5-mpi
ior
lammps-mpi
netcdf-mpi
neuron-full
neuron-mpi
openmolcas
openmpi
parmetis
python27Packages.cntk
python27Packages.h5py-mpi
python27Packages.mpi4py
python27Packages.neuron-mpi
python27Packages.neurotools
python37Packages.cntk
python37Packages.dftfit
python37Packages.h5py-mpi
python37Packages.lammps-cython
python37Packages.mpi4py
python37Packages.neuron-mpi
quantum-espresso-mpi
raxml-mpi
scalapack
scotch
siesta-mpi

Instructions to test this update (click to expand)

Either download from Cachix:

nix-store -r /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0 \
  --option binary-caches 'https://cache.nixos.org/ https://r-ryantm.cachix.org/' \
  --option trusted-public-keys '
  r-ryantm.cachix.org-1:gkUbLkouDAyvBdpBX0JOdIiD2/DP1ldF3Z3Y6Gqcc4c=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(r-ryantm's Cachix cache is only trusted for this store-path realization.)

Or, build yourself:

nix-build -A openmpi https://github.com/r-ryantm/nixpkgs/archive/3ac23c6354b733eb7bda5c16ff95efcfaf35a8f1.tar.gz

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0
ls -la /nix/store/3ipx4d7mkmiy4dwq0j179lcsjvqh3f2c-openmpi-4.0.0/bin

cc @markuskowa for testing.

Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/openmpi/versions
@markuskowa
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Duplicate of #54877

@markuskowa markuskowa marked this as a duplicate of #54877 Feb 4, 2019
@markuskowa markuskowa closed this Feb 4, 2019
@r-ryantm r-ryantm deleted the auto-update/openmpi branch February 15, 2019 02:58
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