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kent: init at 394 #81550
kent: init at 394 #81550
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Hey, the discussion here: #31210 should help with the licensing issue. Also this situation seems to be comparable: #77519. It seems to me that, unfortunately, the restriction made by |
Thank for the pointers @puzzlewolf !! I'll look into them during the weekend. I think |
This code works for me in Arch linux and Ubuntu. |
Result of 1 package built:- kent |
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not able to see what it failed on, was it a timeout? |
@GrahamcOfBorg eval |
@ryantm is everything ok with this PR? I see there is one changes requested, but I am not able to find out what it is. I guess it is the change of license, and that this disappeared when I force pushed. I messed up a bit with the history, so had to fix it. |
@scalavision I probably just didn't re-approve it. Checking now! |
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@GregorySchwartz Oops. Fixed in #103036 |
Motivation for this change
Kent utilities are a very versatile and fast suite of bioinformatic tools that has been available for a long time. It has some very nice tools to optimize for visualization of big data.
Things done
I have put the
mit
license, however some of these tools are not allowed to be used outside non-profit organizations. My understanding of nixpkgs is that it is completely non-profit.For
lib
,inc
andutils
the MIT wording has been used:The licenses where there are exceptions from the
mit
license says this:Should I choose something else than
mit
?It is possible to build the
utility suite
without these libraries, but I am also working on addingensembl-vep
, where these libraries are required. Since there also are commercial binaries in nixpkgs, I don't think this should be a problem, but I am not a lawyer ..I really hope these tools can be added to
nixpkgs
.sandbox
innix.conf
on non-NixOS linux)nix-shell -p nixpkgs-review --run "nixpkgs-review wip"
./result/bin/
)nix path-info -S
before and after)