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python3Packages.pandas: fix tests #109075

Merged
merged 1 commit into from Jan 12, 2021
Merged

python3Packages.pandas: fix tests #109075

merged 1 commit into from Jan 12, 2021

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jonringer
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@jonringer jonringer commented Jan 12, 2021 •
edited

Motivation for this change

Tests now have relative imports to other test files,
so pytest needs to be executed in the
$out/${python.sitePackages}/pandas directory to make
these assumptions valid

Things done
  • Tested using sandboxing (nix.useSandbox on NixOS, or option sandbox in nix.conf on non-NixOS linux)
  • Built on platform(s)
    • NixOS
    • macOS
    • other Linux distributions
  • Tested via one or more NixOS test(s) if existing and applicable for the change (look inside nixos/tests)
  • Tested compilation of all pkgs that depend on this change using nix-shell -p nixpkgs-review --run "nixpkgs-review wip"
  • Tested execution of all binary files (usually in ./result/bin/)
  • Determined the impact on package closure size (by running nix path-info -S before and after)
  • Ensured that relevant documentation is up to date
  • Fits CONTRIBUTING.md.

@jonringer
python3Packages.pandas: fix tests
916047c 
Tests now have relative imports to other test files,
so pytest needs to be executed in the
$out/${python.sitePackages}/pandas directory to make
these assumptions valid
@jonringer jonringer requested a review from FRidh as a code owner January 12, 2021 03:17
@jonringer
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@GrahamcOfBorg build python3Packages.pandas

@ofborg ofborg bot requested review from 7c6f434c and knedlsepp January 12, 2021 04:55
@jonringer
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just a reminder that all of these are currently broken in master:

https://github.com/NixOS/nixpkgs/pull/109075

7 packages marked as broken and skipped:
mlflow-server python37Packages.mlflow python37Packages.rl-coach python37Packages.trackpy python38Packages.mlflow python38Packages.rl-coach python38Packages.trackpy

43 packages failed to build:
apache-airflow cq-editor python37Packages.aplpy python37Packages.arviz python37Packages.caffe python37Packages.dask-glm python37Packages.dask-ml python37Packages.dftfit python37Packages.graspologic python37Packages.imgaug python37Packages.intake python37Packages.mask-rcnn python37Packages.optuna python37Packages.pymatgen-lammps python37Packages.pymc3 python37Packages.qiskit python37Packages.qiskit-aer python37Packages.qiskit-aqua python37Packages.qiskit-ignis python37Packages.reproject python37Packages.spectral-cube python37Packages.sumo python37Packages.sunpy python38Packages.arviz python38Packages.caffe python38Packages.dask-glm python38Packages.dask-ml python38Packages.dftfit python38Packages.graspologic python38Packages.imgaug python38Packages.intake python38Packages.mask-rcnn python38Packages.optuna python38Packages.pymatgen-lammps python38Packages.pymc3 python38Packages.qiskit python38Packages.qiskit-aer python38Packages.qiskit-aqua python38Packages.qiskit-ignis python38Packages.spectral-cube python38Packages.sumo python38Packages.sunpy sageWithDoc

205 packages built:
csvs-to-sqlite python37Packages.Quandl python37Packages.acoustics python37Packages.altair python37Packages.apptools python37Packages.asdf python37Packages.atomman python37Packages.awkward0 python37Packages.batchgenerators python37Packages.bkcharts python37Packages.cirq python37Packages.clifford python37Packages.cnvkit python37Packages.colorcet python37Packages.csvs-to-sqlite python37Packages.cufflinks python37Packages.dask python37Packages.dask-gateway python37Packages.dask-image python37Packages.dask-jobqueue python37Packages.dask-mpi python37Packages.dask-xgboost python37Packages.datasets python37Packages.datashader python37Packages.distributed python37Packages.drms python37Packages.duckdb python37Packages.envisage python37Packages.fastparquet python37Packages.flammkuchen python37Packages.geopandas python37Packages.glymur python37Packages.google-cloud-automl python37Packages.google-cloud-bigquery python37Packages.heudiconv python37Packages.holoviews python37Packages.hvplot python37Packages.ibis-framework python37Packages.image-match python37Packages.imagecorruptions python37Packages.imbalanced-learn python37Packages.ipydatawidgets python37Packages.lammps-cython python37Packages.mayavi python37Packages.mesa python37Packages.mlxtend python37Packages.nbsmoke python37Packages.nilearn python37Packages.nipype python37Packages.osmnx python37Packages.osmpythontools python37Packages.pandas python37Packages.pandas-datareader python37Packages.partd python37Packages.phik python37Packages.pims python37Packages.ppscore python37Packages.pvlib python37Packages.pyarrow python37Packages.pybids python37Packages.pyfftw python37Packages.pygmt python37Packages.pymatgen python37Packages.pyregion python37Packages.pytest-astropy python37Packages.pytest-astropy-header python37Packages.pytrends python37Packages.pywick python37Packages.qiskit-ibmq-provider python37Packages.qiskit-terra python37Packages.radio_beam python37Packages.rpy2 python37Packages.runway-python python37Packages.scikit-bio python37Packages.scikitimage python37Packages.seaborn python37Packages.shap python37Packages.skorch python37Packages.slicer python37Packages.sparse python37Packages.spyder-kernels_0_5 python37Packages.spyder_3 python37Packages.statsmodels python37Packages.streamz python37Packages.stumpy python37Packages.stytra python37Packages.tablib python37Packages.tensorly python37Packages.test-tube python37Packages.tiledb python37Packages.traittypes python37Packages.transformers python37Packages.uproot3 python37Packages.uproot3-methods python37Packages.vega python37Packages.vega_datasets python37Packages.vidstab python37Packages.wrf-python python37Packages.xarray python37Packages.xgboost python37Packages.yfinance python38Packages.Quandl python38Packages.acoustics python38Packages.altair python38Packages.aplpy python38Packages.apptools python38Packages.asdf python38Packages.atomman python38Packages.awkward0 python38Packages.batchgenerators python38Packages.bkcharts python38Packages.cirq python38Packages.clifford python38Packages.cnvkit python38Packages.colorcet python38Packages.cufflinks python38Packages.dask python38Packages.dask-gateway python38Packages.dask-image python38Packages.dask-jobqueue python38Packages.dask-mpi python38Packages.dask-xgboost python38Packages.datasets python38Packages.datashader python38Packages.distributed python38Packages.drms python38Packages.duckdb python38Packages.envisage python38Packages.fastparquet python38Packages.flammkuchen python38Packages.geopandas python38Packages.glymur python38Packages.google-cloud-automl python38Packages.google-cloud-bigquery python38Packages.holoviews python38Packages.hvplot python38Packages.image-match python38Packages.imagecorruptions python38Packages.imbalanced-learn python38Packages.ipydatawidgets python38Packages.lammps-cython python38Packages.mayavi python38Packages.mesa python38Packages.mlxtend python38Packages.nbsmoke python38Packages.nilearn python38Packages.nipype python38Packages.osmnx python38Packages.osmpythontools python38Packages.pandas python38Packages.pandas-datareader python38Packages.partd python38Packages.phik python38Packages.pims python38Packages.ppscore python38Packages.pvlib python38Packages.pyarrow python38Packages.pybids python38Packages.pyfftw python38Packages.pygmt python38Packages.pymatgen python38Packages.pyregion python38Packages.pytest-astropy python38Packages.pytest-astropy-header python38Packages.pytrends python38Packages.pywick python38Packages.qiskit-ibmq-provider python38Packages.qiskit-terra python38Packages.radio_beam python38Packages.reproject python38Packages.rpy2 python38Packages.runway-python python38Packages.scikit-bio python38Packages.scikitimage python38Packages.seaborn python38Packages.shap python38Packages.skorch python38Packages.slicer python38Packages.sparse python38Packages.spyder-kernels_0_5 python38Packages.spyder_3 python38Packages.statsmodels python38Packages.streamz python38Packages.stumpy python38Packages.stytra python38Packages.tablib python38Packages.tensorly python38Packages.test-tube python38Packages.tiledb python38Packages.traittypes python38Packages.transformers python38Packages.uproot3 python38Packages.uproot3-methods python38Packages.vega python38Packages.vega_datasets python38Packages.vidstab python38Packages.wrf-python python38Packages.xarray python38Packages.xgboost python38Packages.yfinance sage streamlit tebreak truvari visidata

@jonringer jonringer merged commit 3fe3dcd into NixOS:master Jan 12, 2021
@jonringer jonringer deleted the fix-pandas branch January 12, 2021 07:58
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Reviewers

@SuperSandro2000 SuperSandro2000 SuperSandro2000 approved these changes

@FRidh FRidh Awaiting requested review from FRidh

@7c6f434c 7c6f434c Awaiting requested review from 7c6f434c

@knedlsepp knedlsepp Awaiting requested review from knedlsepp

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