Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

libdeflate: 1.6 -> 1.7 #103449

Merged
merged 1 commit into from Nov 24, 2020
Merged

Conversation

r-ryantm
Copy link
Contributor

Automatic update generated by nixpkgs-update tools. This update was made based on information from https://github.com/ebiggers/libdeflate/releases.

meta.description for libdeflate is: "Fast DEFLATE/zlib/gzip compressor and decompressor"

meta.homepage for libdeflate is: "https://github.com/ebiggers/libdeflate"

meta.changelog for libdeflate is: ""

Updates performed
  • Version update
To inspect upstream changes
Impact
Checks done (click to expand)

Rebuild report (if merged into master) (click to expand)
39 total rebuild path(s)

13 package rebuild(s)

13 x86_64-linux rebuild(s)
9 i686-linux rebuild(s)
9 x86_64-darwin rebuild(s)
8 aarch64-linux rebuild(s)


First fifty rebuilds by attrpath
deeptools
libdeflate
lumpy
python27Packages.HTSeq
python27Packages.pysam
python37Packages.HTSeq
python37Packages.cnvkit
python37Packages.pysam
python38Packages.HTSeq
python38Packages.cnvkit
python38Packages.pysam
tebreak
truvari
Instructions to test this update (click to expand)

Either download from Cachix:

nix-store -r /nix/store/rm7m7b5c6q8n25praww0wafq71xrx10h-libdeflate-1.7 \
  --option binary-caches 'https://cache.nixos.org/ https://nix-community.cachix.org/' \
  --option trusted-public-keys '
  nix-community.cachix.org-1:mB9FSh9qf2dCimDSUo8Zy7bkq5CX+/rkCWyvRCYg3Fs=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(The Cachix cache is only trusted for this store-path realization.)
For the Cachix download to work, your user must be in the trusted-users list or you can use sudo since root is effectively trusted.

Or, build yourself:

nix-build -A libdeflate https://github.com/r-ryantm/nixpkgs/archive/5a3b2c18e743ea77aac4a7e6de82deb4e8acbae2.tar.gz

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/rm7m7b5c6q8n25praww0wafq71xrx10h-libdeflate-1.7
ls -la /nix/store/rm7m7b5c6q8n25praww0wafq71xrx10h-libdeflate-1.7/bin


Pre-merge build results

We have automatically built all packages that will get rebuilt due to
this change.

This gives evidence on whether the upgrade will break dependent packages.
Note sometimes packages show up as failed to build independent of the
change, simply because they are already broken on the target branch.

nixpkgs-review encountered an error. Please check the logs at https://r.ryantm.com/log/ for more information.


Maintainer pings

cc @orivej for testing.

@SuperSandro2000
Copy link
Member

Result of nixpkgs-review pr 103449 run on x86_64-darwin 1

8 packages marked as broken and skipped:
  • deeptools
  • python27Packages.HTSeq
  • python37Packages.HTSeq
  • python37Packages.cnvkit
  • python38Packages.HTSeq
  • python38Packages.cnvkit
  • tebreak
  • truvari
1 package built:
  • libdeflate

@SuperSandro2000
Copy link
Member

SuperSandro2000 commented Nov 24, 2020

Result of nixpkgs-review pr 103449 run on x86_64-linux 1

1 package marked as broken and skipped:
  • python27Packages.HTSeq
1 package failed to build:
  • lumpy
11 packages built:
  • deeptools
  • libdeflate
  • python27Packages.pysam
  • python37Packages.HTSeq
  • python37Packages.cnvkit
  • python37Packages.pysam
  • python38Packages.HTSeq
  • python38Packages.cnvkit
  • python38Packages.pysam
  • tebreak
  • truvari

dmd fails before and after this which is a dependency of lumpy:

Test runnable/gdb1.d failed.  The logged output:
/build/dmd/generated/linux/release/64/dmd -conf= -m64 -Irunnable -g -fPIC  -odtest_results/runnable -oftest_results/runnable/gdb1_0  runnable/gdb1.d
gdb test_results/runnable/gdb1_0 --batch -x test_results/runnable/gdb1_0.gdb
Breakpoint 1 at 0x401147: file ../../druntime/import/core/internal/entrypoint.d, line 29.
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/nix/store/a6rnjp15qgp8a699dlffqj94hzy1nldg-glibc-2.32/lib/libthread_db.so.1".

Breakpoint 1, main (argc=3, argv=0x7fffffffbcf8) at ../../druntime/import/core/internal/entrypoint.d:29
29                  return _d_run_main(argc, argv, &_Dmain);
RESULT=test_results/runnable/gdb1_0.gdb:5: Error in sourced command file:
No symbol "args" in current context.


==============================
Test runnable/gdb1.d failed: expected rc == 0, exited with rc == 1

make[1]: *** [Makefile:156: test_results/runnable/gdb1.d.out] Error 1
make[1]: *** Waiting for unfinished jobs....
 ... runnable/foreach.d             -fPIC (-inline -release -g -O)
 ... runnable/foreach2.d            -fPIC (-inline -release -g -O)
 ... runnable/foreach3.d            -fPIC (-inline -release -g -O)
 ... runnable/foreach5.d            -fPIC (-inline -release -g -O)
 ... runnable/funclit.d             -fPIC (-inline -release -g -O)
 ... runnable/functype.d            -fPIC (-inline -release -g -O)
 ... runnable/foreach4.d            -fPIC (-inline -release -g -O)
make: *** [Makefile:188: start_runnable_tests] Error 2
make: Leaving directory '/build/dmd/test'
builder for '/nix/store/yd9ala0sf8djwv637yn3ac3b9wxnv373-dmd-2.091.1.drv' failed with exit code 2
error: build of '/nix/store/yd9ala0sf8djwv637yn3ac3b9wxnv373-dmd-2.091.1.drv' failed

@SuperSandro2000 SuperSandro2000 merged commit 8d5eb69 into NixOS:master Nov 24, 2020
@r-ryantm r-ryantm deleted the auto-update/libdeflate branch November 25, 2020 04:38
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants