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python27Packages.biopython: 1.75 -> 1.76 #76372

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merged 1 commit into from Dec 26, 2019

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Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/python2.7-biopython/versions.

meta.description for python27Packages.biopython is: '"Python library for bioinformatics"'.

meta.homepage for python27Packages.biopython is: '"https://biopython.org/wiki/Documentation"

Checks done (click to expand)
Rebuild report (if merged into master) (click to expand)

25 total rebuild path(s)

7 package rebuild(s)

6 x86_64-linux rebuild(s)
6 i686-linux rebuild(s)
6 x86_64-darwin rebuild(s)
7 aarch64-linux rebuild(s)

First fifty rebuilds by attrpath
eggnog-mapper
python27Packages.biopython
python27Packages.cnvkit
python37Packages.biopython
python37Packages.cnvkit
python38Packages.biopython
python38Packages.cnvkit

Instructions to test this update (click to expand)

Either download from Cachix:

nix-store -r /nix/store/m0cxhjpdzyd4kdabhi502mcdj76sc20w-python2.7-biopython-1.76 \
  --option binary-caches 'https://cache.nixos.org/ https://r-ryantm.cachix.org/' \
  --option trusted-public-keys '
  r-ryantm.cachix.org-1:gkUbLkouDAyvBdpBX0JOdIiD2/DP1ldF3Z3Y6Gqcc4c=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(r-ryantm's Cachix cache is only trusted for this store-path realization.)

Or, build yourself:

nix-build -A python27Packages.biopython https://github.com/r-ryantm/nixpkgs/archive/00907b2b44c9e11b4c7ea8707dbadc9f86fca20e.tar.gz

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/m0cxhjpdzyd4kdabhi502mcdj76sc20w-python2.7-biopython-1.76
ls -la /nix/store/m0cxhjpdzyd4kdabhi502mcdj76sc20w-python2.7-biopython-1.76/bin

cc @luispedro for testing.

@ofborg ofborg bot requested a review from luispedro December 24, 2019 08:34
@marsam marsam merged commit 1001790 into NixOS:master Dec 26, 2019
@r-ryantm r-ryantm deleted the auto-update/python2.7-biopython branch January 6, 2020 03:24
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2 participants