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Patch/atomtype missing valency #180

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merged 2 commits into from Nov 28, 2015
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johnmay
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@johnmay johnmay commented Nov 28, 2015

Should fix most of failures... I've also tightened up the immutable atom type instance so we'll get fails elsewhere at attempts to change the values.

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johnmay commented Nov 28, 2015

Hmm looks like still some problems with other parts but should be easy to fix.

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egonw commented Nov 28, 2015

[Immutable] maybe we can discuss splitting mutable/immutable in Cambridge for CDK 2.2 ?

egonw added a commit that referenced this pull request Nov 28, 2015
@egonw egonw merged commit f68b211 into master Nov 28, 2015
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johnmay commented Nov 28, 2015

RDKit splits out a ROMol and a RWMol... it causes nothing but problems as you end up needing to create new molecules all the time. I am in favour through of immutable atom properties etc though.

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johnmay commented Nov 28, 2015

just fixed the new failures which look to be due to missing values in some XML configs.

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