Skip to content

Commit

Permalink
Update JavaDoc for 1.5.12.
Browse files Browse the repository at this point in the history
  • Loading branch information
johnmay committed Nov 28, 2015
1 parent 835e716 commit a56473b
Show file tree
Hide file tree
Showing 3,152 changed files with 28,293 additions and 14,399 deletions.
The diff you're trying to view is too large. We only load the first 3000 changed files.
22 changes: 19 additions & 3 deletions 1.5/docs/api/allclasses-frame.html
Expand Up @@ -2,16 +2,17 @@
<!-- NewPage -->
<html lang="en">
<head>
<!-- Generated by javadoc (version 1.7.0_79) on Sun Aug 30 20:47:54 BST 2015 -->
<!-- Generated by javadoc (version 1.7.0_79) on Sat Nov 28 16:09:48 GMT 2015 -->
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>All Classes (cdk 1.5.11 API)</title>
<meta name="date" content="2015-08-30">
<title>All Classes (cdk 1.5.12 API)</title>
<meta name="date" content="2015-11-28">
<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style">
</head>
<body>
<h1 class="bar">All Classes</h1>
<div class="indexContainer">
<ul>
<li><a href="org/openscience/cdk/depict/Abbreviations.html" title="class in org.openscience.cdk.depict" target="classFrame">Abbreviations</a></li>
<li><a href="org/openscience/cdk/io/formats/ABINITFormat.html" title="class in org.openscience.cdk.io.formats" target="classFrame">ABINITFormat</a></li>
<li><a href="org/openscience/cdk/qsar/AbstractAtomicDescriptor.html" title="class in org.openscience.cdk.qsar" target="classFrame">AbstractAtomicDescriptor</a></li>
<li><a href="org/openscience/cdk/qsar/AbstractAtomPairDescriptor.html" title="class in org.openscience.cdk.qsar" target="classFrame">AbstractAtomPairDescriptor</a></li>
Expand Down Expand Up @@ -172,6 +173,7 @@ <h1 class="bar">All Classes</h1>
<li><a href="org/openscience/cdk/renderer/generators/BasicSceneGenerator.Margin.html" title="class in org.openscience.cdk.renderer.generators" target="classFrame">BasicSceneGenerator.Margin</a></li>
<li><a href="org/openscience/cdk/renderer/generators/BasicSceneGenerator.Scale.html" title="class in org.openscience.cdk.renderer.generators" target="classFrame">BasicSceneGenerator.Scale</a></li>
<li><a href="org/openscience/cdk/renderer/generators/BasicSceneGenerator.ShowMoleculeTitle.html" title="class in org.openscience.cdk.renderer.generators" target="classFrame">BasicSceneGenerator.ShowMoleculeTitle</a></li>
<li><a href="org/openscience/cdk/renderer/generators/BasicSceneGenerator.ShowReactionTitle.html" title="class in org.openscience.cdk.renderer.generators" target="classFrame">BasicSceneGenerator.ShowReactionTitle</a></li>
<li><a href="org/openscience/cdk/renderer/generators/BasicSceneGenerator.ShowTooltip.html" title="class in org.openscience.cdk.renderer.generators" target="classFrame">BasicSceneGenerator.ShowTooltip</a></li>
<li><a href="org/openscience/cdk/renderer/generators/BasicSceneGenerator.UseAntiAliasing.html" title="class in org.openscience.cdk.renderer.generators" target="classFrame">BasicSceneGenerator.UseAntiAliasing</a></li>
<li><a href="org/openscience/cdk/renderer/generators/BasicSceneGenerator.UsedFontStyle.html" title="class in org.openscience.cdk.renderer.generators" target="classFrame">BasicSceneGenerator.UsedFontStyle</a></li>
Expand Down Expand Up @@ -388,6 +390,8 @@ <h1 class="bar">All Classes</h1>
<li><a href="org/openscience/cdk/smsd/algorithm/matchers/DefaultRGraphAtomMatcher.html" title="class in org.openscience.cdk.smsd.algorithm.matchers" target="classFrame">DefaultRGraphAtomMatcher</a></li>
<li><a href="org/openscience/cdk/smsd/algorithm/matchers/DefaultVFAtomMatcher.html" title="class in org.openscience.cdk.smsd.algorithm.matchers" target="classFrame">DefaultVFAtomMatcher</a></li>
<li><a href="org/openscience/cdk/smsd/algorithm/matchers/DefaultVFBondMatcher.html" title="class in org.openscience.cdk.smsd.algorithm.matchers" target="classFrame">DefaultVFBondMatcher</a></li>
<li><a href="org/openscience/cdk/depict/Depiction.html" title="class in org.openscience.cdk.depict" target="classFrame">Depiction</a></li>
<li><a href="org/openscience/cdk/depict/DepictionGenerator.html" title="class in org.openscience.cdk.depict" target="classFrame">DepictionGenerator</a></li>
<li><a href="org/openscience/cdk/qsar/DescriptorEngine.html" title="class in org.openscience.cdk.qsar" target="classFrame">DescriptorEngine</a></li>
<li><a href="org/openscience/cdk/qsar/DescriptorException.html" title="class in org.openscience.cdk.qsar" target="classFrame">DescriptorException</a></li>
<li><a href="org/openscience/cdk/qsar/DescriptorSpecification.html" title="class in org.openscience.cdk.qsar" target="classFrame">DescriptorSpecification</a></li>
Expand Down Expand Up @@ -770,6 +774,7 @@ <h1 class="bar">All Classes</h1>
<li><a href="org/openscience/cdk/renderer/generators/MappingGenerator.MappingLineWidth.html" title="class in org.openscience.cdk.renderer.generators" target="classFrame">MappingGenerator.MappingLineWidth</a></li>
<li><a href="org/openscience/cdk/renderer/generators/MappingGenerator.ShowAtomAtomMapping.html" title="class in org.openscience.cdk.renderer.generators" target="classFrame">MappingGenerator.ShowAtomAtomMapping</a></li>
<li><a href="org/openscience/cdk/isomorphism/Mappings.html" title="class in org.openscience.cdk.isomorphism" target="classFrame">Mappings</a></li>
<li><a href="org/openscience/cdk/renderer/elements/MarkedElement.html" title="class in org.openscience.cdk.renderer.elements" target="classFrame">MarkedElement</a></li>
<li><a href="org/openscience/cdk/isomorphism/matchers/smarts/MassAtom.html" title="class in org.openscience.cdk.isomorphism.matchers.smarts" target="classFrame">MassAtom</a></li>
<li><a href="org/openscience/cdk/formula/MassToFormulaTool.html" title="class in org.openscience.cdk.formula" target="classFrame">MassToFormulaTool</a></li>
<li><a href="org/openscience/cdk/smsd/algorithm/vflib/map/Match.html" title="class in org.openscience.cdk.smsd.algorithm.vflib.map" target="classFrame">Match</a></li>
Expand Down Expand Up @@ -798,6 +803,7 @@ <h1 class="bar">All Classes</h1>
<li><a href="org/openscience/cdk/io/MDLV2000Writer.SPIN_MULTIPLICITY.html" title="enum in org.openscience.cdk.io" target="classFrame">MDLV2000Writer.SPIN_MULTIPLICITY</a></li>
<li><a href="org/openscience/cdk/io/formats/MDLV3000Format.html" title="class in org.openscience.cdk.io.formats" target="classFrame">MDLV3000Format</a></li>
<li><a href="org/openscience/cdk/io/MDLV3000Reader.html" title="class in org.openscience.cdk.io" target="classFrame">MDLV3000Reader</a></li>
<li><a href="org/openscience/cdk/io/MDLV3000Writer.html" title="class in org.openscience.cdk.io" target="classFrame">MDLV3000Writer</a></li>
<li><a href="org/openscience/cdk/libio/md/MDMolecule.html" title="class in org.openscience.cdk.libio.md" target="classFrame">MDMolecule</a></li>
<li><a href="org/openscience/cdk/io/cml/MDMoleculeConvention.html" title="class in org.openscience.cdk.io.cml" target="classFrame">MDMoleculeConvention</a></li>
<li><a href="org/openscience/cdk/libio/cml/MDMoleculeCustomizer.html" title="class in org.openscience.cdk.libio.cml" target="classFrame">MDMoleculeCustomizer</a></li>
Expand Down Expand Up @@ -1063,7 +1069,11 @@ <h1 class="bar">All Classes</h1>
<li><a href="org/openscience/cdk/renderer/RendererModel.html" title="class in org.openscience.cdk.renderer" target="classFrame">RendererModel</a></li>
<li><a href="org/openscience/cdk/renderer/RendererModel.ColorHash.html" title="class in org.openscience.cdk.renderer" target="classFrame">RendererModel.ColorHash</a></li>
<li><a href="org/openscience/cdk/renderer/RendererModel.ExternalHighlightColor.html" title="class in org.openscience.cdk.renderer" target="classFrame">RendererModel.ExternalHighlightColor</a></li>
<li><a href="org/openscience/cdk/renderer/RendererModel.MarkedOutput.html" title="class in org.openscience.cdk.renderer" target="classFrame">RendererModel.MarkedOutput</a></li>
<li><a href="org/openscience/cdk/renderer/RendererModel.Padding.html" title="class in org.openscience.cdk.renderer" target="classFrame">RendererModel.Padding</a></li>
<li><a href="org/openscience/cdk/renderer/RendererModel.SelectionColor.html" title="class in org.openscience.cdk.renderer" target="classFrame">RendererModel.SelectionColor</a></li>
<li><a href="org/openscience/cdk/renderer/RendererModel.TitleColor.html" title="class in org.openscience.cdk.renderer" target="classFrame">RendererModel.TitleColor</a></li>
<li><a href="org/openscience/cdk/renderer/RendererModel.TitleFontScale.html" title="class in org.openscience.cdk.renderer" target="classFrame">RendererModel.TitleFontScale</a></li>
<li><a href="org/openscience/cdk/libio/md/Residue.html" title="class in org.openscience.cdk.libio.md" target="classFrame">Residue</a></li>
<li><a href="org/openscience/cdk/isomorphism/mcss/RGraph.html" title="class in org.openscience.cdk.isomorphism.mcss" target="classFrame">RGraph</a></li>
<li><a href="org/openscience/cdk/isomorphism/matchers/RGroup.html" title="class in org.openscience.cdk.isomorphism.matchers" target="classFrame">RGroup</a></li>
Expand Down Expand Up @@ -1104,6 +1114,10 @@ <h1 class="bar">All Classes</h1>
<li><a href="org/openscience/cdk/renderer/generators/standard/SelectionVisibility.html" title="class in org.openscience.cdk.renderer.generators.standard" target="classFrame">SelectionVisibility</a></li>
<li><a href="org/openscience/cdk/reaction/type/parameters/SetReactionCenter.html" title="class in org.openscience.cdk.reaction.type.parameters" target="classFrame">SetReactionCenter</a></li>
<li><a href="org/openscience/cdk/io/setting/SettingManager.html" title="class in org.openscience.cdk.io.setting" target="classFrame">SettingManager</a></li>
<li><a href="org/openscience/cdk/sgroup/Sgroup.html" title="class in org.openscience.cdk.sgroup" target="classFrame">Sgroup</a></li>
<li><a href="org/openscience/cdk/sgroup/SgroupBracket.html" title="class in org.openscience.cdk.sgroup" target="classFrame">SgroupBracket</a></li>
<li><a href="org/openscience/cdk/sgroup/SgroupKey.html" title="enum in org.openscience.cdk.sgroup" target="classFrame">SgroupKey</a></li>
<li><a href="org/openscience/cdk/sgroup/SgroupType.html" title="enum in org.openscience.cdk.sgroup" target="classFrame">SgroupType</a></li>
<li><a href="org/openscience/cdk/reaction/type/SharingAnionReaction.html" title="class in org.openscience.cdk.reaction.type" target="classFrame">SharingAnionReaction</a></li>
<li><a href="org/openscience/cdk/reaction/type/SharingChargeDBReaction.html" title="class in org.openscience.cdk.reaction.type" target="classFrame">SharingChargeDBReaction</a></li>
<li><a href="org/openscience/cdk/reaction/type/SharingChargeSBReaction.html" title="class in org.openscience.cdk.reaction.type" target="classFrame">SharingChargeSBReaction</a></li>
Expand Down Expand Up @@ -1177,6 +1191,8 @@ <h1 class="bar">All Classes</h1>
<li><a href="org/openscience/cdk/renderer/generators/standard/StandardGenerator.Highlighting.html" title="class in org.openscience.cdk.renderer.generators.standard" target="classFrame">StandardGenerator.Highlighting</a></li>
<li><a href="org/openscience/cdk/renderer/generators/standard/StandardGenerator.HighlightStyle.html" title="enum in org.openscience.cdk.renderer.generators.standard" target="classFrame">StandardGenerator.HighlightStyle</a></li>
<li><a href="org/openscience/cdk/renderer/generators/standard/StandardGenerator.OuterGlowWidth.html" title="class in org.openscience.cdk.renderer.generators.standard" target="classFrame">StandardGenerator.OuterGlowWidth</a></li>
<li><a href="org/openscience/cdk/renderer/generators/standard/StandardGenerator.SgroupBracketDepth.html" title="class in org.openscience.cdk.renderer.generators.standard" target="classFrame">StandardGenerator.SgroupBracketDepth</a></li>
<li><a href="org/openscience/cdk/renderer/generators/standard/StandardGenerator.SgroupFontScale.html" title="class in org.openscience.cdk.renderer.generators.standard" target="classFrame">StandardGenerator.SgroupFontScale</a></li>
<li><a href="org/openscience/cdk/renderer/generators/standard/StandardGenerator.StrokeRatio.html" title="class in org.openscience.cdk.renderer.generators.standard" target="classFrame">StandardGenerator.StrokeRatio</a></li>
<li><a href="org/openscience/cdk/renderer/generators/standard/StandardGenerator.SymbolMarginRatio.html" title="class in org.openscience.cdk.renderer.generators.standard" target="classFrame">StandardGenerator.SymbolMarginRatio</a></li>
<li><a href="org/openscience/cdk/renderer/generators/standard/StandardGenerator.Visibility.html" title="class in org.openscience.cdk.renderer.generators.standard" target="classFrame">StandardGenerator.Visibility</a></li>
Expand Down

0 comments on commit a56473b

Please sign in to comment.