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Fixed a PMD warning: removed an underscore from a non-final var
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Change-Id: I1a7bdaec31884988b96ac4701eb1535ae73a948d
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@egonw
egonw committed Dec 14, 2014
1 parent f1f6f13 commit be81fea
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Showing 28 changed files with 168 additions and 168 deletions.
12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugAminoAcid.java
View file
Expand Up @@ -656,16 +656,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugAtom.java
View file
Expand Up @@ -432,16 +432,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugAtomContainer.java
View file
Expand Up @@ -677,16 +677,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugAtomContainerSet.java
View file
Expand Up @@ -122,16 +122,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugAtomType.java
View file
Expand Up @@ -167,16 +167,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugBioPolymer.java
View file
Expand Up @@ -659,16 +659,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugBond.java
View file
Expand Up @@ -162,16 +162,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugChemFile.java
View file
Expand Up @@ -125,16 +125,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugChemModel.java
View file
Expand Up @@ -125,16 +125,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugChemObject.java
View file
Expand Up @@ -141,16 +141,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** @inheritDoc */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugChemSequence.java
View file
Expand Up @@ -121,16 +121,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugCrystal.java
View file
Expand Up @@ -666,16 +666,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
Expand Down
12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugElectronContainer.java
View file
Expand Up @@ -134,16 +134,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugElement.java
View file
Expand Up @@ -168,16 +168,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugFragmentAtom.java
View file
Expand Up @@ -447,16 +447,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
Expand Down
12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugIsotope.java
View file
Expand Up @@ -174,16 +174,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
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12 changes: 6 additions & 6 deletions base/datadebug/src/main/java/org/openscience/cdk/debug/DebugLonePair.java
View file
Expand Up @@ -166,16 +166,16 @@ public void setID(String identifier) {

/** {@inheritDoc} */
@Override
public void setFlag(int flag_type, boolean flag_value) {
logger.debug("Setting flag: ", flag_type + "=" + flag_value);
super.setFlag(flag_type, flag_value);
public void setFlag(int flagType, boolean flagValue) {
logger.debug("Setting flag: ", flagType + "=" + flagValue);
super.setFlag(flagType, flagValue);
}

/** {@inheritDoc} */
@Override
public boolean getFlag(int flag_type) {
logger.debug("Setting flag: ", flag_type + "=" + super.getFlag(flag_type));
return super.getFlag(flag_type);
public boolean getFlag(int flagType) {
logger.debug("Setting flag: ", flagType + "=" + super.getFlag(flagType));
return super.getFlag(flagType);
}

/** {@inheritDoc} */
Expand Down

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