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fix most of octave_modular examples for new labels
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Soeren Sonnenburg committed May 24, 2012
1 parent 495a859 commit 95c124d
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Showing 24 changed files with 26 additions and 26 deletions.
Expand Up @@ -23,7 +23,7 @@
feats_train.set_features(fm_train_dna);
feats_test.set_features(fm_test_dna);
kernel=WeightedDegreeStringKernel(feats_train, feats_train, degree);
labels=Labels(label_train_dna);
labels=BinaryLabels(label_train_dna);
svm=SVMLight(C, kernel, labels);
svm.train();

Expand All @@ -39,7 +39,7 @@

kernel2=WeightedDegreeStringKernel(feats_train, feats_train, degree);

labels2=Labels(label_train_dna);
labels2=BinaryLabels(label_train_dna);

% we regularize versus the previously obtained solution
dasvm = DomainAdaptationSVM(C, kernel2, labels2, svm, 1.0);
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Expand Up @@ -16,7 +16,7 @@
C=1.2;
epsilon=1e-5;
num_threads=1;
labels=Labels(label_train_multiclass);
labels=MulticlassLabels(label_train_multiclass);

svm=GMNPSVM(C, kernel, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -16,7 +16,7 @@
C=1.2;
epsilon=1e-5;
num_threads=2;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

svm=GPBTSVM(C, kernel, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -14,7 +14,7 @@

k=3;
num_threads=1;
labels=Labels(label_train_multiclass);
labels=MulticlassLabels(label_train_multiclass);

knn=KNN(k, distance, labels);
knn.parallel.set_num_threads(num_threads);
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Expand Up @@ -13,7 +13,7 @@

gamma=3;
num_threads=1;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

lda=LDA(gamma, feats_train, labels);
lda.parallel.set_num_threads(num_threads);
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Expand Up @@ -18,7 +18,7 @@
C=1.2;
epsilon=1e-5;
num_threads=1;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

svm=LibLinear(C, feats_train, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -15,7 +15,7 @@
feats_test=RealFeatures(testdata_real);
kernel=GaussianKernel(feats_train, feats_train, width);

labels=Labels(trainlab);
labels=BinaryLabels(trainlab);
svm=LibSVM(C, kernel, labels);
svm.parallel.set_num_threads(8);
svm.train();
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Expand Up @@ -16,7 +16,7 @@
C=1.2;
epsilon=1e-5;
num_threads=2;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

svm=LibSVM(C, kernel, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -16,7 +16,7 @@
C=1.2;
epsilon=1e-5;
num_threads=1;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

svm=MPDSVM(C, kernel, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -15,7 +15,7 @@
C=1.2;
epsilon=1e-5;
num_threads=8;
labels=Labels(label_train_multiclass);
labels=MulticlassLabels(label_train_multiclass);

svm=MulticlassLibSVM(C, kernel, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -21,7 +21,7 @@
epsilon=1e-5;
num_threads=1;
label=double(label);
labels=Labels(label);
labels=BinaryLabels(label);

svm=NewtonSVM(C, feats_train, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -14,7 +14,7 @@
learn_rate=1.;
max_iter=1000;
num_threads=1;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

perceptron=Perceptron(feats_train, labels);
perceptron.set_learn_rate(learn_rate);
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Expand Up @@ -19,7 +19,7 @@
epsilon=1e-3;
num_threads=1;
max_train_time=1.;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

svm=SubGradientSVM(C, feats_train, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -21,7 +21,7 @@
% create feature and label objects
feats_train = RealFeatures(fm_train_real);
feats_test = RealFeatures(fm_test_real);
labels = Labels(fm_train_labels);
labels = BinaryLabels(fm_train_labels);

% create kernel
kernel = GaussianKernel(feats_train, feats_train, width);
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Expand Up @@ -22,7 +22,7 @@
C=1.2;
epsilon=1e-5;
num_threads=3;
labels=Labels(label_train_dna);
labels=BinaryLabels(label_train_dna);

svm=SVMLight(C, kernel, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -18,7 +18,7 @@
C=0.9;
epsilon=1e-5;
num_threads=1;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

svm=SVMLin(C, feats_train, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -18,7 +18,7 @@
C=0.9;
epsilon=1e-5;
num_threads=1;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

svm=SVMOcas(C, feats_train, labels);
svm.set_epsilon(epsilon);
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Expand Up @@ -18,7 +18,7 @@
C=0.9;
num_iter=5
num_threads=1;
labels=Labels(label_train_twoclass);
labels=BinaryLabels(label_train_twoclass);

svm=SVMSGD(C, feats_train, labels);
svm.set_epochs(num_iter)
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2 changes: 1 addition & 1 deletion examples/undocumented/octave_modular/kernel_auc_modular.m
Expand Up @@ -12,6 +12,6 @@
subkernel=GaussianKernel(feats_train, feats_train, width);

kernel=AUCKernel(0, subkernel);
kernel.setup_auc_maximization( Labels(label_train_twoclass) );
kernel.setup_auc_maximization( BinaryLabels(label_train_twoclass) );
km_train=kernel.get_kernel_matrix();

Expand Up @@ -23,7 +23,7 @@
feats_test.obtain_from_char(charfeat, order-1, order, gap, reverse);

pie=PluginEstimate();
labels=Labels(label_train_dna);
labels=BinaryLabels(label_train_dna);
pie.set_labels(labels);
pie.set_features(feats_train);
pie.train();
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4 changes: 2 additions & 2 deletions examples/undocumented/octave_modular/mkl_multiclass_modular.m
Expand Up @@ -41,7 +41,7 @@
C=1.2;
epsilon=1e-5;
num_threads=1;
labels=Labels(label_train_multiclass);
labels=MulticlassLabels(label_train_multiclass);

% MKL_MULTICLASS
disp('MKL_MULTICLASS')
Expand All @@ -54,4 +54,4 @@

kernel.init(feats_train, feats_test);
result=mkl.apply().get_labels();
result
result
Expand Up @@ -16,7 +16,7 @@
C=0.9;
tau=1e-6;
num_threads=1;
labels=Labels(label_train);
labels=RegressionLabels(label_train);

krr=KernelRidgeRegression(tau, kernel, labels);
krr.parallel.set_num_threads(num_threads);
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Expand Up @@ -17,7 +17,7 @@
epsilon=1e-5;
tube_epsilon=1e-2;
num_threads=3;
labels=Labels(label_train);
labels=RegressionLabels(label_train);

svr=LibSVR(C, epsilon, kernel, labels);
svr.set_tube_epsilon(tube_epsilon);
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Expand Up @@ -18,7 +18,7 @@
epsilon=1e-5;
tube_epsilon=1e-2;
num_threads=3;
labels=Labels(label_train);
labels=RegressioLabels(label_train);

svr=SVRLight(C, epsilon, kernel, labels);
svr.set_tube_epsilon(tube_epsilon);
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