Updated for the new FP api by Jonathan

Change-Id: I11abe3b02a2df286bb012c21bb2f167be6e281b5
cdk · Jul 28, 2012 · 8939f04 · 8939f04
1 parent 2abf5a1
commit 8939f04
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/src/test/org/openscience/cdk/fingerprint/PubchemFingerprinterTest.java b/src/test/org/openscience/cdk/fingerprint/PubchemFingerprinterTest.java
@@ -224,8 +224,8 @@ public void testMultithreadedUsage() throws Exception {
 
 
         IFingerprinter fp = new PubchemFingerprinter();
-        BitSet bs1 = fp.getFingerprint(mol1);
-        BitSet bs2 = fp.getFingerprint(mol2);
+        BitSet bs1 = fp.getBitFingerprint(mol1).asBitSet();
+        BitSet bs2 = fp.getBitFingerprint(mol2).asBitSet();
 
         class FpRunner implements Callable<BitSet> {
             IAtomContainer mol;
@@ -236,7 +236,7 @@ public BitSet call() throws Exception {
                 BitSet fp = null;
                 IFingerprinter fpr = new PubchemFingerprinter();
                 try {
-                    fp = fpr.getFingerprint(mol);
+                    fp = fpr.getBitFingerprint(mol).asBitSet();
                 } catch (CDKException e) {
                     e.printStackTrace();  //To change body of catch statement use File | Settings | File Templates.
                 }

diff --git a/src/test/org/openscience/cdk/fingerprint/SignatureFingerprinterTest.java b/src/test/org/openscience/cdk/fingerprint/SignatureFingerprinterTest.java
@@ -64,6 +64,6 @@ public void testUnsupportedMethod() throws Exception {
     	SignatureFingerprinter fingerprinter = new SignatureFingerprinter(0);
         SmilesParser sp = new SmilesParser(DefaultChemObjectBuilder.getInstance());
         IAtomContainer mol = sp.parseSmiles("O(NC)CC");
-        fingerprinter.getFingerprint(mol);
+        fingerprinter.getBitFingerprint(mol);
     }
 }