Removed more unused local variables (PMD report).

Signed-off-by: John May <john.wilkinsonmay@gmail.com>
cdk · Aug 29, 2014 · 3bdfc6a · 3bdfc6a
1 parent 2ad6c76
commit 3bdfc6a
Show file tree

Hide file tree

Showing 3 changed files with 2 additions and 12 deletions.
diff --git a/misc/extra/src/main/java/org/openscience/cdk/graph/invariant/HuLuIndexTool.java b/misc/extra/src/main/java/org/openscience/cdk/graph/invariant/HuLuIndexTool.java
@@ -52,8 +52,6 @@ public class HuLuIndexTool
     public static double getEAIDNumber(AtomContainer atomContainer) throws NoSuchAtomException,
             BadMatrixFormatException,IndexOutOfBoundsException
     {
-        boolean debug = false;
-
         GIMatrix matrix = new GIMatrix(getExtendedAdjacenyMatrix(atomContainer));
 
         GIMatrix tempMatrix = matrix;
@@ -81,7 +79,6 @@ public static double getEAIDNumber(AtomContainer atomContainer) throws NoSuchAto
     public static double[][] getExtendedAdjacenyMatrix(AtomContainer atomContainer)
         throws NoSuchAtomException
     {
-        boolean debug = false;
         double[][] adjaMatrix = ConnectionMatrix.getMatrix(atomContainer);
 
         logger.debug("adjacency matrix: ");
@@ -120,7 +117,6 @@ public static double[][] getExtendedAdjacenyMatrix(AtomContainer atomContainer)
 
     public static double[] getAtomWeights(AtomContainer atomContainer) throws NoSuchAtomException
     {
-        boolean debug = false;
         IAtom atom,headAtom,endAtom;        
         int headAtomPosition,endAtomPosition;
 

diff --git a/tool/formula/src/main/java/org/openscience/cdk/formula/IsotopePatternGenerator.java b/tool/formula/src/main/java/org/openscience/cdk/formula/IsotopePatternGenerator.java
@@ -192,12 +192,10 @@ private boolean calculateAbundanceAndMass(String elementSymbol) {
 			}
 
 			Iterator<Double> itr = isotopeMassAndAbundance.keySet().iterator();
-			int i = 0;
 			abundance_Mass = new IsotopePattern();
 			while (itr.hasNext()) {
 				mass = itr.next();
 				abundance_Mass.addIsotope(new IsotopeContainer(mass, isotopeMassAndAbundance.get(mass)));
-				i++;
 			}
 		}
 

diff --git a/tool/sdg/src/main/java/org/openscience/cdk/layout/RingPlacer.java b/tool/sdg/src/main/java/org/openscience/cdk/layout/RingPlacer.java
@@ -332,12 +332,8 @@ private  void placeBridgedRing(IRing ring, IAtomContainer sharedAtoms, Point2d s
 		startAngle = GeometryTools.getAngle(startAtom.getPoint2d().x - ringCenter.x, startAtom.getPoint2d().y - ringCenter.y);
 
 		IAtom currentAtom = startAtom;
-        // determine first bond in Ring
-        int k = 0;
-//        for (k = 0; k < ring.getElectronContainerCount(); k++) {
-//            if (ring.getElectronContainer(k) instanceof IBond) break;
-//        }
-        IBond currentBond = sharedAtoms.getBond(0);
+
+                IBond currentBond = sharedAtoms.getBond(0);
 		Vector atomsToDraw = new Vector();
 		for (int i = 0; i < ring.getBondCount(); i++)
 		{