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Add Installation help page
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Valentin Georgiev committed Mar 16, 2012
1 parent 048b851 commit 4b60bad
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15 changes: 10 additions & 5 deletions plugins/net.bioclipse.r.ui/html/about.html
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<HEAD>
<META HTTP-EQUIV="CONTENT-TYPE" CONTENT="text/html; charset=utf-8">
<TITLE>Bioclipse-R - About</TITLE>
<link rel="stylesheet" href="../../PRODUCT_PLUGIN/narrow_book.css" type="text/css">
<link rel="stylesheet" href="../../PRODUCT_PLUGIN/narrow_book.css" type="text/css">
<style type="text/css">
p {text-align:justify;}
img {
margin-left:10px;
margin-bottom:10px;
}
</style>
</HEAD>
<BODY LANG="en-US" DIR="LTR">
<h1>About Bioclipse-R</h1>
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<p>
If you use the Bioclipse-R feature in a scientific project, please cite:
</p>

<p>
Ola Spjuth, Valentin Georgiev, Lars Carlsson, Jonathan Alvarsson, Arvid Berg, Jarl E.S. Wikberg, and Martin Eklund<br>
<b>Bioclipse-R: Integrating management and visualization of life science data with statistical analysis</b><br>
<i>manuscript in preparation</i> xxxx, <b>x</b>:x

<p>
<br>
</p>
<h2>License</h2>
Bioclipse and the QSAR plugins are released under <a href="epl-v10.html">
Eclipse Public License (EPL)</a>.
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38 changes: 38 additions & 0 deletions plugins/net.bioclipse.r.ui/html/installation.html
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN">
<HTML>
<HEAD>
<META HTTP-EQUIV="CONTENT-TYPE" CONTENT="text/html; charset=utf-8">
<TITLE>Installing Bioclipse-R</TITLE>
<link rel="stylesheet" href="../../PRODUCT_PLUGIN/narrow_book.css" type="text/css">
<style type="text/css">
p {text-align:justify;}
</style>

</HEAD>
<BODY LANG="en-US" DIR="LTR">
<h1>Installing Bioclipse-R</h1>

<p>
Bioclipse-R is a set of plugins for Bioclipse. There are two ways to obtain a Bioclipse-R package:
</p>

<h2>Download the pre-built BCRPackage package</h2>
<p>
Please see links available from the <a href="http://pele.farmbio.uu.se/jenkins/job/BCRPackage/">
Bioclipse development update site</a>.
</p>
<h2>Download Bioclipse and use the Install New Bioclipse Feature option</h2>
<p>
This guarantees the latest version of Bioclipse and Bioclipse-R.
</p>
<p>
Bioclipse is available from <a href="http:/www.bioclipse.net">www.bioclipse.net</a>,
see the <a href="http://wiki.bioclipse.net/index.php?title=Installing_Bioclipse2">installation page</a> for more information.
</p>
<p>
After installing Bioclipse, start it and go to the menu <b>Help > Install New Bioclipse Feature</b>.
Check <b>Bioclipse-R Integration</b> and press finish, and after restart you have Bioclipse-R installed.
</p>

</BODY>
</HTML>
4 changes: 2 additions & 2 deletions plugins/net.bioclipse.r.ui/toc.xml
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<topic label="User guide" >
<topic label="R console" href="html/rconsole.html" />
<topic label="R Editor">
<topic label="Overview Page" href="html/editor/overviewPage.html" />
</topic>
<topic label="Overview Page" href="html/editor/rEditorOverviewPage.html" />
</topic>
<topic label="Running R code" href="html/runningr.html" />
<topic label="R sessions" href="html/sessions.html" />
<topic label="Preferences" href="html/prefs.html" />
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